RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PIRTP0C851 137 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 PIPP12273 146 aaPredicted RBP0.62□□□□□ -2.31
VCL-203ENST00000461383 ARPC4P59998 168 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 S100A12P80511 92 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 FAM74A4Q5TZK3 123 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 SCIMPQ6UWF3 145 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 Q6ZUT4 128 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 KCNRGQ8N5I3 272 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
VCL-203ENST00000461383 TRAV12-3A0A0B4J271 114 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 MCRIP1C9JLW8 97 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 SNCGO76070 127 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 GUCA1AP43080 201 aaPredicted RBP0.61□□□□□ -2.31
VCL-203ENST00000461383 ELOF1P60002 83 aaKnown RBP0.61□□□□□ -2.31
VCL-203ENST00000461383 KRTAP5-10Q6L8G5 202 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 FAM103A1Q9BTL3 118 aaKnown RBP0.61□□□□□ -2.31
VCL-203ENST00000461383 TMEM242Q9NWH2 141 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 CACNA1EQ15878 2313 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 PHIPQ8WWQ0 1821 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 NAV3Q8IVL0 2385 aa0.61□□□□□ -2.31
VCL-203ENST00000461383 MYH8P13535 1937 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 ARFGEF1Q9Y6D6 1849 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 SSBP1Q04837 148 aaKnown RBP0.6□□□□□ -2.31
VCL-203ENST00000461383 SLC48A1Q6P1K1 146 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 TSC22D3Q99576 134 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 FAM107BQ9H098 131 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 RPRMQ9NS64 109 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 PTPRMP28827 1452 aa0.6□□□□□ -2.31
VCL-203ENST00000461383 NRXN2Q9P2S2 1712 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 NPC2P61916 151 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 C4orf33Q8N1A6 199 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 C20orf197Q8N268 126 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 SPTSSAQ969W0 71 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 TMEM191AQ9H0A3 160 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 PLAC8Q9NZF1 115 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 CCDC167Q9P0B6 97 aa0.59□□□□□ -2.31
VCL-203ENST00000461383 MUC22E2RYF6 1773 aaPredicted RBP0.59□□□□□ -2.32
VCL-203ENST00000461383 A0A096LNT2 108 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 IFNA17P01571 189 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 CCL3L1P16619 93 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 EMX2Q04743 252 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 C9orf116Q5BN46 136 aaPredicted RBP0.58□□□□□ -2.32
VCL-203ENST00000461383 COX7B2Q8TF08 81 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 PRR15LQ9BU68 103 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 V9GYV3 84 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 CADP27708 2225 aa0.58□□□□□ -2.32
VCL-203ENST00000461383 TNS1Q9HBL0 1735 aaKnown RBP0.58□□□□□ -2.32
VCL-203ENST00000461383 TMEM2Q9UHN6 1383 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 LAMB1P07942 1786 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 FAM25AB3EWG3 89 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 FAM25CB3EWG5 89 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 FAM25GB3EWG6 89 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 NDUFB6O95139 128 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 HMGN1P05114 100 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 UBE2G1P62253 170 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 S100A7L2Q5SY68 101 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 ADGRB1O14514 1584 aa0.57□□□□□ -2.32
VCL-203ENST00000461383 PITX3O75364 302 aa0.56□□□□□ -2.32
VCL-203ENST00000461383 ARL11Q969Q4 196 aa0.56□□□□□ -2.32
VCL-203ENST00000461383 BPESC1Q9GZL8 116 aa0.56□□□□□ -2.32
VCL-203ENST00000461383 TNCP24821 2201 aa0.56□□□□□ -2.32
VCL-203ENST00000461383 DAPK1P53355 1430 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 KCPQ6ZWJ8 1503 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 TRBV7-1A0A0A6YYK4 115 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 CBLN1P23435 193 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 SELENOWP63302 87 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 SPTSSBQ8NFR3 76 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 C10orf82Q8WW14 230 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 COPS9Q8WXC6 57 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 SDF2Q99470 211 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 PDCD10Q9BUL8 212 aa0.55□□□□□ -2.32
VCL-203ENST00000461383 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
VCL-203ENST00000461383 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
VCL-203ENST00000461383 PIGBOS1A0A0B4J2F0 54 aa0.54□□□□□ -2.32
VCL-203ENST00000461383 FAM92AA1XBS5 289 aa0.54□□□□□ -2.32
VCL-203ENST00000461383 APODP05090 189 aa0.54□□□□□ -2.32
VCL-203ENST00000461383 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.54□□□□□ -2.32
VCL-203ENST00000461383 SEC11CQ9BY50 192 aa0.54□□□□□ -2.32
VCL-203ENST00000461383 BICRAQ9NZM4 1560 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 TENM3Q9P273 2699 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 NWD2Q9ULI1 1742 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 NDUFA2O43678 99 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 ACYP2P14621 99 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 HIST1H1DP16402 221 aaKnown RBP0.53□□□□□ -2.32
VCL-203ENST00000461383 VMO1Q7Z5L0 202 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 SMIM11BQ8TCY0 68 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 DPH3Q96FX2 82 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 SCP2D1Q9UJQ7 156 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 APCP25054 2843 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 MYOM3Q5VTT5 1437 aa0.53□□□□□ -2.32
VCL-203ENST00000461383 GRIN2AQ12879 1464 aa0.53□□□□□ -2.33
VCL-203ENST00000461383 JMJD1CQ15652 2540 aa0.53□□□□□ -2.33
VCL-203ENST00000461383 A0A087WTM6 91 aa0.52□□□□□ -2.33
VCL-203ENST00000461383 GNG7O60262 68 aa0.52□□□□□ -2.33
VCL-203ENST00000461383 SMIM6P0DI80 62 aa0.52□□□□□ -2.33
VCL-203ENST00000461383 EDDM3BP56851 147 aa0.52□□□□□ -2.33
VCL-203ENST00000461383 LINC00470Q9BZP3 86 aa0.52□□□□□ -2.33
VCL-203ENST00000461383 CDK13Q14004 1512 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms