RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SPANXN1Q5VSR9 72 aa10.49□□□□□ -0.73
VARS-219ENST00000461328 Q6ZSN1 163 aa10.49□□□□□ -0.73
VARS-219ENST00000461328 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
VARS-219ENST00000461328 SFRP2Q96HF1 295 aa10.49□□□□□ -0.73
VARS-219ENST00000461328 KIAA1109Q2LD37 5005 aa10.49□□□□□ -0.73
VARS-219ENST00000461328 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 TIRAPP58753 221 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 SSTP61278 116 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
VARS-219ENST00000461328 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 SMIM12Q96EX1 92 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 TPPP3Q9BW30 176 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 BOLA1Q9Y3E2 137 aa10.48□□□□□ -0.73
VARS-219ENST00000461328 MUC21A0A0G2JKD1 596 aa10.47□□□□□ -0.73
VARS-219ENST00000461328 MUC21A0A140T8X8 626 aa10.47□□□□□ -0.73
VARS-219ENST00000461328 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
VARS-219ENST00000461328 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
VARS-219ENST00000461328 BIN3Q9NQY0 253 aa10.47□□□□□ -0.73
VARS-219ENST00000461328 DYNC1H1Q14204 4646 aaKnown RBP10.46□□□□□ -0.73
VARS-219ENST00000461328 IGHV3-38A0A0C4DH36 116 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 SNAI2O43623 268 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 IGLV2-8P01709 118 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 P01737 135 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 CRYGDP07320 174 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 OR5AL1P0C617 328 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 RPS20P60866 119 aaKnown RBP10.46□□□□□ -0.73
VARS-219ENST00000461328 ZNF56Q15929 161 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 LELP1Q5T871 98 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 SPATA12Q7Z6I5 190 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 C10orf126Q8N4M7 172 aa10.46□□□□□ -0.73
VARS-219ENST00000461328 DNAH11Q96DT5 4516 aa10.46□□□□□ -0.74
VARS-219ENST00000461328 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
VARS-219ENST00000461328 XKRY2A2RUG3 117 aa10.45□□□□□ -0.74
VARS-219ENST00000461328 RBFOX3A6NFN3 312 aa10.45□□□□□ -0.74
VARS-219ENST00000461328 GZMBP10144 247 aa10.45□□□□□ -0.74
VARS-219ENST00000461328 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
VARS-219ENST00000461328 K7EP13 123 aa10.44□□□□□ -0.74
VARS-219ENST00000461328 SMIM17P0DL12 118 aa10.44□□□□□ -0.74
VARS-219ENST00000461328 CEBPGP53567 150 aa10.44□□□□□ -0.74
VARS-219ENST00000461328 Q6ZRN7 208 aaPredicted RBP10.44□□□□□ -0.74
VARS-219ENST00000461328 FER1L6-AS1Q8NA97 138 aa10.44□□□□□ -0.74
VARS-219ENST00000461328 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
VARS-219ENST00000461328 MSRB1Q9NZV6 116 aa10.44□□□□□ -0.74
VARS-219ENST00000461328 C19orf71A6NCJ1 209 aa10.43□□□□□ -0.74
VARS-219ENST00000461328 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
VARS-219ENST00000461328 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
VARS-219ENST00000461328 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
VARS-219ENST00000461328 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
VARS-219ENST00000461328 TNFRSF18Q9Y5U5 241 aa10.43□□□□□ -0.74
VARS-219ENST00000461328 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 F5H697 171 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 RAB4BP61018 213 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
VARS-219ENST00000461328 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
VARS-219ENST00000461328 EIF5A2Q9GZV4 153 aaKnown RBP10.42□□□□□ -0.74
VARS-219ENST00000461328 Q9UF83 564 aa10.42□□□□□ -0.74
VARS-219ENST00000461328 A0A087WWC5 75 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 TMEM250H0YL14 139 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 EREGO14944 169 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 KRTAP10-2P60368 255 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 ERVFC1-1P60608 527 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
VARS-219ENST00000461328 MGPP08493 103 aa10.4□□□□□ -0.74
VARS-219ENST00000461328 IGLC6P0CF74 106 aa10.4□□□□□ -0.74
VARS-219ENST00000461328 CACNG7P62955 275 aa10.4□□□□□ -0.74
VARS-219ENST00000461328 Q9HAA7 133 aa10.4□□□□□ -0.74
VARS-219ENST00000461328 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
VARS-219ENST00000461328 NUDT10Q8NFP7 164 aa10.39□□□□□ -0.75
VARS-219ENST00000461328 NUDT11Q96G61 164 aa10.39□□□□□ -0.75
VARS-219ENST00000461328 RNASE7Q9H1E1 156 aaKnown RBP10.39□□□□□ -0.75
VARS-219ENST00000461328 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
VARS-219ENST00000461328 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
VARS-219ENST00000461328 F2Z2F3 143 aa10.38□□□□□ -0.75
VARS-219ENST00000461328 K7EN84 100 aa10.38□□□□□ -0.75
VARS-219ENST00000461328 PSCAO43653 123 aa10.38□□□□□ -0.75
VARS-219ENST00000461328 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.38□□□□□ -0.75
VARS-219ENST00000461328 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
VARS-219ENST00000461328 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
VARS-219ENST00000461328 TRGC1P0CF51 173 aa10.37□□□□□ -0.75
VARS-219ENST00000461328 LYZL1Q6UWQ5 148 aa10.37□□□□□ -0.75
VARS-219ENST00000461328 FAM210AQ96ND0 272 aa10.37□□□□□ -0.75
VARS-219ENST00000461328 SMIM7Q9BQ49 75 aa10.37□□□□□ -0.75
VARS-219ENST00000461328 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 UBE2D3P61077 147 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 UBE2D2P62837 147 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 Q8N3U1 123 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 OR10G8Q8NGN5 311 aa10.36□□□□□ -0.75
VARS-219ENST00000461328 A0A087WTM6 91 aa10.35□□□□□ -0.75
VARS-219ENST00000461328 GATCO43716 136 aaKnown RBP10.35□□□□□ -0.75
VARS-219ENST00000461328 CTRLP40313 264 aa10.35□□□□□ -0.75
VARS-219ENST00000461328 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms