RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 RAB19A4D1S5 217 aa15.29■□□□□ 0.04
TRAF4-207ENST00000461195 GNG4P50150 75 aa15.29■□□□□ 0.04
TRAF4-207ENST00000461195 BLOC1S1P78537 153 aa15.29■□□□□ 0.04
TRAF4-207ENST00000461195 TRAV8-6A0A0B4J262 113 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 GAGE12JA6NER3 117 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 IGLV2-8P01709 118 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 CRYGDP07320 174 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 GAGE1Q13065 139 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 GAGE4Q13068 117 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 GAGE5Q13069 117 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 GAGE13Q4V321 117 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 C14orf178Q8N769 122 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-207ENST00000461195 GTSF1LQ9H1H1 148 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 BOLA1Q9Y3E2 137 aa15.28■□□□□ 0.04
TRAF4-207ENST00000461195 SNAI2O43623 268 aa15.27■□□□□ 0.04
TRAF4-207ENST00000461195 NKX2-5P52952 324 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-207ENST00000461195 OR10J3Q5JRS4 329 aa15.27■□□□□ 0.04
TRAF4-207ENST00000461195 LELP1Q5T871 98 aa15.27■□□□□ 0.04
TRAF4-207ENST00000461195 OR10AG1Q8NH19 301 aa15.27■□□□□ 0.04
TRAF4-207ENST00000461195 DAZAP1Q96EP5 407 aaKnown RBP15.27■□□□□ 0.04
TRAF4-207ENST00000461195 SSBP4Q9BWG4 385 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-207ENST00000461195 IGHV3-38A0A0C4DH36 116 aa15.26■□□□□ 0.03
TRAF4-207ENST00000461195 OR5AL1P0C617 328 aa15.26■□□□□ 0.03
TRAF4-207ENST00000461195 LINC00694P0DN24 101 aa15.26■□□□□ 0.03
TRAF4-207ENST00000461195 Q6ZRN7 208 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-207ENST00000461195 NFE4Q86UQ8 179 aa15.26■□□□□ 0.03
TRAF4-207ENST00000461195 C10orf126Q8N4M7 172 aa15.25■□□□□ 0.03
TRAF4-207ENST00000461195 Q9UF83 564 aa15.25■□□□□ 0.03
TRAF4-207ENST00000461195 DYNC1H1Q14204 4646 aaKnown RBP15.24■□□□□ 0.03
TRAF4-207ENST00000461195 TRBV20OR9-2A0A075B6H5 130 aa15.24■□□□□ 0.03
TRAF4-207ENST00000461195 LINC01556Q5JQF7 62 aa15.24■□□□□ 0.03
TRAF4-207ENST00000461195 SPANXN1Q5VSR9 72 aa15.24■□□□□ 0.03
TRAF4-207ENST00000461195 BIN3Q9NQY0 253 aa15.24■□□□□ 0.03
TRAF4-207ENST00000461195 MSRB1Q9NZV6 116 aa15.24■□□□□ 0.03
TRAF4-207ENST00000461195 TNFRSF18Q9Y5U5 241 aa15.24■□□□□ 0.03
TRAF4-207ENST00000461195 C19orf71A6NCJ1 209 aa15.23■□□□□ 0.03
TRAF4-207ENST00000461195 RPS20P60866 119 aaKnown RBP15.23■□□□□ 0.03
TRAF4-207ENST00000461195 OR2D3Q8NGH3 330 aa15.23■□□□□ 0.03
TRAF4-207ENST00000461195 DNAH11Q96DT5 4516 aa15.23■□□□□ 0.03
TRAF4-207ENST00000461195 MUC21A0A0G2JKD1 596 aa15.22■□□□□ 0.03
TRAF4-207ENST00000461195 MUC21A0A140T8X8 626 aa15.22■□□□□ 0.03
TRAF4-207ENST00000461195 LYPD6BQ8NI32 183 aa15.22■□□□□ 0.03
TRAF4-207ENST00000461195 TRBV10-1A0A0K0K1A3 114 aa15.21■□□□□ 0.03
TRAF4-207ENST00000461195 RBFOX3A6NFN3 312 aa15.21■□□□□ 0.03
TRAF4-207ENST00000461195 P01737 135 aa15.21■□□□□ 0.03
TRAF4-207ENST00000461195 C16orf90A8MZG2 172 aa15.2■□□□□ 0.02
TRAF4-207ENST00000461195 GZMBP10144 247 aa15.2■□□□□ 0.02
TRAF4-207ENST00000461195 RAB4BP61018 213 aa15.2■□□□□ 0.02
TRAF4-207ENST00000461195 SSTP61278 116 aa15.2■□□□□ 0.02
TRAF4-207ENST00000461195 ABCA13Q86UQ4 5058 aa15.2■□□□□ 0.02
TRAF4-207ENST00000461195 A0A087WWC5 75 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 XKRY2A2RUG3 117 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 IGLC6P0CF74 106 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 ZNF56Q15929 161 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 SPATA12Q7Z6I5 190 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 FER1L6-AS1Q8NA97 138 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 TPPP3Q9BW30 176 aa15.19■□□□□ 0.02
TRAF4-207ENST00000461195 TMEM250H0YL14 139 aa15.18■□□□□ 0.02
TRAF4-207ENST00000461195 RPL36AP83881 106 aaKnown RBP15.18■□□□□ 0.02
TRAF4-207ENST00000461195 RPL36ALQ969Q0 106 aaKnown RBP15.18■□□□□ 0.02
TRAF4-207ENST00000461195 IGHV3-30P01768 117 aa15.17■□□□□ 0.02
TRAF4-207ENST00000461195 IGHV3-33P01772 117 aa15.17■□□□□ 0.02
TRAF4-207ENST00000461195 IGHV3-30-3P0DP02 117 aa15.17■□□□□ 0.02
TRAF4-207ENST00000461195 IGHV3-30-5P0DP03 117 aa15.17■□□□□ 0.02
TRAF4-207ENST00000461195 AP1S3Q96PC3 154 aa15.17■□□□□ 0.02
TRAF4-207ENST00000461195 TRBV7-3A0A075B6L6 115 aa15.16■□□□□ 0.02
TRAF4-207ENST00000461195 IBA57-AS1B1ANH7 110 aa15.16■□□□□ 0.02
TRAF4-207ENST00000461195 SMIM17P0DL12 118 aa15.16■□□□□ 0.02
TRAF4-207ENST00000461195 ERVFC1-1P60608 527 aa15.16■□□□□ 0.02
TRAF4-207ENST00000461195 F2Z2F3 143 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 EREGO14944 169 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 CACNG7P62955 275 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 NUDT10Q8NFP7 164 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 OR10G8Q8NGN5 311 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 OCC1Q8TAD7 63 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 NUDT11Q96G61 164 aa15.15■□□□□ 0.02
TRAF4-207ENST00000461195 F5H697 171 aa15.14■□□□□ 0.01
TRAF4-207ENST00000461195 KRTAP10-2P60368 255 aa15.14■□□□□ 0.01
TRAF4-207ENST00000461195 UBE2D3P61077 147 aa15.14■□□□□ 0.01
TRAF4-207ENST00000461195 UBE2D2P62837 147 aa15.14■□□□□ 0.01
TRAF4-207ENST00000461195 TOR2AQ5JU69 321 aa15.14■□□□□ 0.01
TRAF4-207ENST00000461195 KIF25-AS1Q9Y6Z4 181 aa15.14■□□□□ 0.01
TRAF4-207ENST00000461195 K7EN84 100 aa15.13■□□□□ 0.01
TRAF4-207ENST00000461195 EIF5A2Q9GZV4 153 aaKnown RBP15.13■□□□□ 0.01
TRAF4-207ENST00000461195 NEXN-AS1Q8NBZ9 246 aa15.12■□□□□ 0.01
TRAF4-207ENST00000461195 RNASE7Q9H1E1 156 aaKnown RBP15.12■□□□□ 0.01
TRAF4-207ENST00000461195 RPP21Q9H633 154 aaKnown RBP15.12■□□□□ 0.01
TRAF4-207ENST00000461195 CEBPGP53567 150 aa15.11■□□□□ 0.01
TRAF4-207ENST00000461195 LAGE3Q14657 143 aa15.11■□□□□ 0.01
TRAF4-207ENST00000461195 LYZL1Q6UWQ5 148 aa15.11■□□□□ 0.01
TRAF4-207ENST00000461195 FAM210AQ96ND0 272 aa15.11■□□□□ 0.01
TRAF4-207ENST00000461195 Q9HAA7 133 aa15.11■□□□□ 0.01
TRAF4-207ENST00000461195 A0A087WTM6 91 aa15.1■□□□□ 0.01
TRAF4-207ENST00000461195 NDUFS6O75380 124 aaKnown RBP15.1■□□□□ 0.01
TRAF4-207ENST00000461195 Q8N3U1 123 aa15.1■□□□□ 0.01
TRAF4-207ENST00000461195 PSCAO43653 123 aa15.09■□□□□ 0.01
TRAF4-207ENST00000461195 KRTAP4-5Q9BYR2 181 aa15.09■□□□□ 0.01
TRAF4-207ENST00000461195 URGCP-MRPS24S4R325 110 aa15.09■□□□□ 0.01
TRAF4-207ENST00000461195 MGPP08493 103 aa15.08■□□□□ 0
TRAF4-207ENST00000461195 TRGC1P0CF51 173 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms