RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 DNAH10OSP0CZ25 163 aa12.5□□□□□ -0.41
COL9A2-205ENST00000461118 RPL19P84098 196 aaKnown RBP12.5□□□□□ -0.41
COL9A2-205ENST00000461118 WFDC10BQ8IUB3 73 aa12.5□□□□□ -0.41
COL9A2-205ENST00000461118 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
COL9A2-205ENST00000461118 SSBP4Q9BWG4 385 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-205ENST00000461118 LY96Q9Y6Y9 160 aa12.5□□□□□ -0.41
COL9A2-205ENST00000461118 TRAV9-2A0A087WT02 112 aa12.49□□□□□ -0.41
COL9A2-205ENST00000461118 CRYGDP07320 174 aa12.49□□□□□ -0.41
COL9A2-205ENST00000461118 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
COL9A2-205ENST00000461118 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
COL9A2-205ENST00000461118 ALKAL2Q6UX46 152 aa12.49□□□□□ -0.41
COL9A2-205ENST00000461118 M0R381 172 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 SNAI2O43623 268 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 LINC00315P59091 139 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 ATP6V0E2Q8NHE4 81 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 LYPD6BQ8NI32 183 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
COL9A2-205ENST00000461118 RAB19A4D1S5 217 aa12.47□□□□□ -0.41
COL9A2-205ENST00000461118 OR5AL1P0C617 328 aa12.47□□□□□ -0.41
COL9A2-205ENST00000461118 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
COL9A2-205ENST00000461118 GNG4P50150 75 aa12.47□□□□□ -0.41
COL9A2-205ENST00000461118 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
COL9A2-205ENST00000461118 FAT1Q14517 4588 aa12.46□□□□□ -0.41
COL9A2-205ENST00000461118 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.41
COL9A2-205ENST00000461118 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.41
COL9A2-205ENST00000461118 EVI2AP22794 236 aa12.46□□□□□ -0.41
COL9A2-205ENST00000461118 LELP1Q5T871 98 aa12.46□□□□□ -0.41
COL9A2-205ENST00000461118 Q6ZRN7 208 aaPredicted RBP12.46□□□□□ -0.41
COL9A2-205ENST00000461118 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.41
COL9A2-205ENST00000461118 DMBT1Q9UGM3 2413 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-205ENST00000461118 A0A087WWL8 130 aa12.45□□□□□ -0.42
COL9A2-205ENST00000461118 NKX2-5P52952 324 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-205ENST00000461118 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
COL9A2-205ENST00000461118 OR10AG1Q8NH19 301 aa12.45□□□□□ -0.42
COL9A2-205ENST00000461118 Q9UF83 564 aa12.45□□□□□ -0.42
COL9A2-205ENST00000461118 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
COL9A2-205ENST00000461118 IGHV3-38A0A0C4DH36 116 aa12.44□□□□□ -0.42
COL9A2-205ENST00000461118 NFE4Q86UQ8 179 aa12.44□□□□□ -0.42
COL9A2-205ENST00000461118 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
COL9A2-205ENST00000461118 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
COL9A2-205ENST00000461118 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 RPS20P60866 119 aaKnown RBP12.43□□□□□ -0.42
COL9A2-205ENST00000461118 GAGE1Q13065 139 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 GAGE4Q13068 117 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 GAGE5Q13069 117 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 LINC01556Q5JQF7 62 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 C10orf126Q8N4M7 172 aa12.43□□□□□ -0.42
COL9A2-205ENST00000461118 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
COL9A2-205ENST00000461118 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
COL9A2-205ENST00000461118 MSRB1Q9NZV6 116 aa12.42□□□□□ -0.42
COL9A2-205ENST00000461118 TNFRSF18Q9Y5U5 241 aa12.42□□□□□ -0.42
COL9A2-205ENST00000461118 RBFOX3A6NFN3 312 aa12.41□□□□□ -0.42
COL9A2-205ENST00000461118 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
COL9A2-205ENST00000461118 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
COL9A2-205ENST00000461118 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
COL9A2-205ENST00000461118 OR2D3Q8NGH3 330 aa12.41□□□□□ -0.42
COL9A2-205ENST00000461118 A0A087WWC5 75 aa12.4□□□□□ -0.42
COL9A2-205ENST00000461118 P01737 135 aa12.4□□□□□ -0.42
COL9A2-205ENST00000461118 RAB4BP61018 213 aa12.4□□□□□ -0.42
COL9A2-205ENST00000461118 MYCBP2O75592 4640 aa12.4□□□□□ -0.42
COL9A2-205ENST00000461118 VPS13BQ7Z7G8 4022 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 MUC21A0A0G2JKD1 596 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 MUC21A0A140T8X8 626 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 XKRY2A2RUG3 117 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 EPM2AB3EWF7 344 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
COL9A2-205ENST00000461118 IBA57-AS1B1ANH7 110 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 NDUFS6O75380 124 aaKnown RBP12.38□□□□□ -0.43
COL9A2-205ENST00000461118 GZMBP10144 247 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 XGP55808 180 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 FER1L6-AS1Q8NA97 138 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 OCC1Q8TAD7 63 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
COL9A2-205ENST00000461118 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
COL9A2-205ENST00000461118 F2Z2F3 143 aa12.37□□□□□ -0.43
COL9A2-205ENST00000461118 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
COL9A2-205ENST00000461118 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
COL9A2-205ENST00000461118 K7EN84 100 aa12.36□□□□□ -0.43
COL9A2-205ENST00000461118 FUSP35637 526 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL9A2-205ENST00000461118 UBE2D3P61077 147 aa12.36□□□□□ -0.43
COL9A2-205ENST00000461118 UBE2D2P62837 147 aa12.36□□□□□ -0.43
COL9A2-205ENST00000461118 CACNG7P62955 275 aa12.36□□□□□ -0.43
COL9A2-205ENST00000461118 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
COL9A2-205ENST00000461118 SSTP61278 116 aa12.35□□□□□ -0.43
COL9A2-205ENST00000461118 ZNF56Q15929 161 aa12.35□□□□□ -0.43
COL9A2-205ENST00000461118 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
COL9A2-205ENST00000461118 IGHV3-30P01768 117 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 IGHV3-33P01772 117 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 INAFM2P0DMQ5 153 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 IGHV3-30-3P0DP02 117 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 IGHV3-30-5P0DP03 117 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 ERVFC1-1P60608 527 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 LAGE3Q14657 143 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms