RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CTRLP40313 264 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 CT83Q5H943 113 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 ZFP2Q6ZN57 461 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 COMMD7Q86VX2 200 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 V9GYV3 84 aa9.71□□□□□ -0.86
HDLBP-229ENST00000460826 LINC00862A6NCI5 91 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 A8MWL6 223 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 P0DMU3 169 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 GYPEP15421 78 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
HDLBP-229ENST00000460826 TRBV6-4A0A1B0GX49 114 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 F2Z2F3 143 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 K7EQD1 137 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 RHODO00212 210 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 ADCYAP1P18509 176 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 CACNG7P62955 275 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 UQCC3Q6UW78 93 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
HDLBP-229ENST00000460826 C15orf54Q8N8G6 183 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 OR10G8Q8NGN5 311 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 Q9UF83 564 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 KIF25-AS1Q9Y6Z4 181 aa9.69□□□□□ -0.86
HDLBP-229ENST00000460826 NTF3P20783 257 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 LINC00315P59091 139 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 ESRGQ1W209 222 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 UBE2DNLQ8IWF7 75 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 PGLYRP4Q96LB8 373 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
HDLBP-229ENST00000460826 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
HDLBP-229ENST00000460826 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
HDLBP-229ENST00000460826 RHOHQ15669 191 aa9.67□□□□□ -0.86
HDLBP-229ENST00000460826 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
HDLBP-229ENST00000460826 RNF212Q495C1 297 aa9.67□□□□□ -0.86
HDLBP-229ENST00000460826 WDR73Q6P4I2 378 aa9.67□□□□□ -0.86
HDLBP-229ENST00000460826 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
HDLBP-229ENST00000460826 HIGD1CA8MV81 97 aa9.66□□□□□ -0.86
HDLBP-229ENST00000460826 SRIP30626 198 aa9.66□□□□□ -0.86
HDLBP-229ENST00000460826 ZNF56Q15929 161 aa9.66□□□□□ -0.86
HDLBP-229ENST00000460826 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
HDLBP-229ENST00000460826 GFRA4Q9GZZ7 299 aa9.66□□□□□ -0.86
HDLBP-229ENST00000460826 EVI2AP22794 236 aa9.65□□□□□ -0.86
HDLBP-229ENST00000460826 CCL18P55774 89 aa9.65□□□□□ -0.86
HDLBP-229ENST00000460826 TWIST1Q15672 202 aa9.65□□□□□ -0.86
HDLBP-229ENST00000460826 NEGR1Q7Z3B1 354 aa9.65□□□□□ -0.86
HDLBP-229ENST00000460826 DNAH2Q9P225 4427 aa9.65□□□□□ -0.87
HDLBP-229ENST00000460826 FAM231BA6NCW3 169 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 F8W036 122 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 RAB4BP61018 213 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 GAGE1Q13065 139 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 GAGE4Q13068 117 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 GAGE5Q13069 117 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
HDLBP-229ENST00000460826 SMIM27A0A1W2PRY6 76 aa9.63□□□□□ -0.87
HDLBP-229ENST00000460826 F5H697 171 aa9.63□□□□□ -0.87
HDLBP-229ENST00000460826 MGPP08493 103 aa9.63□□□□□ -0.87
HDLBP-229ENST00000460826 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
HDLBP-229ENST00000460826 PNRC1Q12796 327 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-229ENST00000460826 ZNRF2Q8NHG8 242 aa9.63□□□□□ -0.87
HDLBP-229ENST00000460826 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
HDLBP-229ENST00000460826 MRPS16Q9Y3D3 137 aaKnown RBP9.63□□□□□ -0.87
HDLBP-229ENST00000460826 FRAS1Q86XX4 4008 aa9.62□□□□□ -0.87
HDLBP-229ENST00000460826 IGLV2-18A0A075B6J9 118 aa9.62□□□□□ -0.87
HDLBP-229ENST00000460826 A0A1B0GUT8 65 aa9.62□□□□□ -0.87
HDLBP-229ENST00000460826 SEC11CQ9BY50 192 aa9.62□□□□□ -0.87
HDLBP-229ENST00000460826 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
HDLBP-229ENST00000460826 FAM3BP58499 235 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-229ENST00000460826 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
HDLBP-229ENST00000460826 NEXN-AS1Q8NBZ9 246 aa9.61□□□□□ -0.87
HDLBP-229ENST00000460826 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
HDLBP-229ENST00000460826 NAT8BQ9UHF3 227 aa9.61□□□□□ -0.87
HDLBP-229ENST00000460826 TRBV10-1A0A0K0K1A3 114 aa9.6□□□□□ -0.87
HDLBP-229ENST00000460826 PPP1R2P9O14990 202 aa9.6□□□□□ -0.87
HDLBP-229ENST00000460826 C10orf91Q5T1B1 145 aa9.6□□□□□ -0.87
HDLBP-229ENST00000460826 SH2D6Q7Z4S9 175 aa9.6□□□□□ -0.87
HDLBP-229ENST00000460826 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
HDLBP-229ENST00000460826 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
HDLBP-229ENST00000460826 M0QY20 66 aa9.59□□□□□ -0.87
HDLBP-229ENST00000460826 M0R2N4 97 aa9.59□□□□□ -0.87
HDLBP-229ENST00000460826 MT-ND4LP03901 98 aa9.59□□□□□ -0.87
HDLBP-229ENST00000460826 TRAV26-2A0A0B4J265 109 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 TIRAPP58753 221 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 UBE2D3P61077 147 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 UBE2D2P62837 147 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 RPL36AP83881 106 aaKnown RBP9.58□□□□□ -0.88
HDLBP-229ENST00000460826 RIGQ13278 110 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 WFDC10BQ8IUB3 73 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 RPL36ALQ969Q0 106 aaKnown RBP9.58□□□□□ -0.88
HDLBP-229ENST00000460826 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms