RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 SSTP61278 116 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.77□□□□□ -1.01
HDAC4-206ENST00000460235 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 PRO0255Q9UI72 69 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 F5H697 171 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 PPP1R17O96001 155 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 HTN3P15516 51 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 TCTAP57738 103 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 FAM3BP58499 235 aaPredicted RBP8.76□□□□□ -1.01
HDAC4-206ENST00000460235 RAB4BP61018 213 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 FAM74A4Q5TZK3 123 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 TMEM191AQ9H0A3 160 aa8.76□□□□□ -1.01
HDAC4-206ENST00000460235 MUC21A0A0G2JKD1 596 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 MUC21A0A140T8X8 626 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 H3BNG1 76 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 ZNF56Q15929 161 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 Q6ZTC4 211 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 SH2D6Q7Z4S9 175 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 C14orf178Q8N769 122 aaPredicted RBP8.75□□□□□ -1.01
HDAC4-206ENST00000460235 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
HDAC4-206ENST00000460235 HHLA3Q9XRX5 114 aa8.75□□□□□ -1.01
HDAC4-206ENST00000460235 PAX4O43316 350 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 MT-ND6P03923 174 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 CAMPP49913 170 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 RHOHQ15669 191 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 MRPL54Q6P161 138 aaKnown RBP8.74□□□□□ -1.01
HDAC4-206ENST00000460235 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 ZNF479Q96JC4 524 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 URGCP-MRPS24S4R325 110 aa8.74□□□□□ -1.01
HDAC4-206ENST00000460235 A0A087WWL8 130 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 TRBV10-1A0A0K0K1A3 114 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 PPBPP02775 128 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 CRYGDP07320 174 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 MGPP08493 103 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 EVI2AP22794 236 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-206ENST00000460235 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 MRAP2Q96G30 205 aa8.73□□□□□ -1.01
HDAC4-206ENST00000460235 TRBV24-1A0A075B6N3 115 aa8.72□□□□□ -1.01
HDAC4-206ENST00000460235 HLA-DQA1P01909 254 aa8.72□□□□□ -1.01
HDAC4-206ENST00000460235 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
HDAC4-206ENST00000460235 FHL2Q14192 279 aa8.72□□□□□ -1.01
HDAC4-206ENST00000460235 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
HDAC4-206ENST00000460235 MUC4Q99102 2169 aa8.72□□□□□ -1.01
HDAC4-206ENST00000460235 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 K7EQD1 137 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 CRYBA4P53673 196 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 RPL36AP83881 106 aaKnown RBP8.71□□□□□ -1.02
HDAC4-206ENST00000460235 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.02
HDAC4-206ENST00000460235 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 GATD1Q8NB37 220 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 RPL36ALQ969Q0 106 aaKnown RBP8.71□□□□□ -1.02
HDAC4-206ENST00000460235 DNAJC30Q96LL9 226 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
HDAC4-206ENST00000460235 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 ELOBQ15370 118 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 FAM104BQ5XKR9 115 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 SAMD10Q9BYL1 202 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 JPT2Q9H910 190 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
HDAC4-206ENST00000460235 TRAV26-1A0A087WT03 109 aa8.69□□□□□ -1.02
HDAC4-206ENST00000460235 IGLL5B9A064 214 aa8.69□□□□□ -1.02
HDAC4-206ENST00000460235 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
HDAC4-206ENST00000460235 LAMTOR2Q9Y2Q5 125 aa8.69□□□□□ -1.02
HDAC4-206ENST00000460235 RAB4AP20338 218 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 HOXA5P20719 270 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 SRIP30626 198 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 CKS2P33552 79 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 TMEM88Q6PEY1 159 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 ATRAIDQ6UW56 229 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 NIT2Q9NQR4 276 aa8.68□□□□□ -1.02
HDAC4-206ENST00000460235 TRBV7-3A0A075B6L6 115 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 PHOX2AO14813 284 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 APCSP02743 223 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 GYPEP15421 78 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 SUMO4Q6EEV6 95 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 NEGR1Q7Z3B1 354 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 ORMDL3Q8N138 153 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
HDAC4-206ENST00000460235 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 A0A0J9YY99 117 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 M0QY20 66 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 TCAPO15273 167 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 NUDT3O95989 172 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 LINC00315P59091 139 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 OR10J3Q5JRS4 329 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 DAZ4Q86SG3 579 aaKnown RBP8.66□□□□□ -1.02
HDAC4-206ENST00000460235 CBLN2Q8IUK8 224 aa8.66□□□□□ -1.02
HDAC4-206ENST00000460235 DAZ3Q9NR90 486 aaKnown RBP8.66□□□□□ -1.02
HDAC4-206ENST00000460235 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms