RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TMEM141Q96I45 108 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 MARF1Q9Y4F3 1742 aaKnown RBP2.19□□□□□ -2.06
CCDC50-203ENST00000460064 PTPRMP28827 1452 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 SBF2Q86WG5 1849 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 CLIP1P30622 1438 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 URB2Q14146 1524 aaKnown RBP2.18□□□□□ -2.06
CCDC50-203ENST00000460064 KIAA1549Q9HCM3 1950 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 LRRIQ1Q96JM4 1722 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 PDCD5O14737 125 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 UBE2G1P62253 170 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 DEFA5Q01523 94 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 Q1T7F1 81 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 ZNF791Q3KP31 576 aaPredicted RBP2.18□□□□□ -2.06
CCDC50-203ENST00000460064 Q8TAT8 98 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 S100A16Q96FQ6 103 aaKnown RBP2.18□□□□□ -2.06
CCDC50-203ENST00000460064 SMCO4Q9NRQ5 59 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 CCDC88CQ9P219 2028 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 IQSEC2Q5JU85 1478 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 CASZ1Q86V15 1759 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 GBF1Q92538 1859 aa2.18□□□□□ -2.06
CCDC50-203ENST00000460064 SMARCA4P51532 1647 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 MYLKQ15746 1914 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 ASAH2BP0C7U1 165 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 BAALC-AS2P0C853 105 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 PRB4P10163 310 aaPredicted RBP2.17□□□□□ -2.06
CCDC50-203ENST00000460064 MIFP14174 115 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 FAUP35544 74 aaKnown RBP2.17□□□□□ -2.06
CCDC50-203ENST00000460064 MIR22HGQ0VDD5 57 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 SPANXN5Q5MJ07 72 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 CASC2Q6XLA1 102 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 C9orf163Q8N9P6 203 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 OR8B3Q8NGG8 313 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 AMELYQ99218 206 aa2.17□□□□□ -2.06
CCDC50-203ENST00000460064 PRDM15P57071 1507 aaPredicted RBP2.17□□□□□ -2.06
CCDC50-203ENST00000460064 MGAMO43451 1857 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 CPAMD8Q8IZJ3 1885 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 DIP2BQ9P265 1576 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 POLA1P09884 1462 aaPredicted RBP2.16□□□□□ -2.06
CCDC50-203ENST00000460064 GOLGA3Q08378 1498 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 C9orf116Q5BN46 136 aaPredicted RBP2.16□□□□□ -2.06
CCDC50-203ENST00000460064 FAM213BQ8TBF2 198 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 CYSTM1Q9H1C7 97 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 MRPL35Q9NZE8 188 aaKnown RBP2.16□□□□□ -2.06
CCDC50-203ENST00000460064 LHFPL6Q9Y693 200 aa2.16□□□□□ -2.06
CCDC50-203ENST00000460064 COL11A1P12107 1806 aaPredicted RBP2.16□□□□□ -2.06
CCDC50-203ENST00000460064 FANCAO15360 1455 aa2.15□□□□□ -2.06
CCDC50-203ENST00000460064 MON2Q7Z3U7 1717 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 TRAV10A0A0B4J240 114 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 HMSDA8MTL9 139 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 H3BRM9 83 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 ATOX1O00244 68 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 ERC2-IT1O76042 136 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 CCL8P80075 99 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 SLC48A1Q6P1K1 146 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 KRTAP26-1Q6PEX3 210 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 TMEM254Q8TBM7 123 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 MYOZ3Q8TDC0 251 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 ST20Q9HBF5 79 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 DOCK1Q14185 1865 aa2.15□□□□□ -2.07
CCDC50-203ENST00000460064 COL24A1Q17RW2 1714 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 FBN1P35555 2871 aaKnown RBP2.14□□□□□ -2.07
CCDC50-203ENST00000460064 PLIN4Q96Q06 1357 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 EPRSP07814 1512 aaKnown RBP2.14□□□□□ -2.07
CCDC50-203ENST00000460064 DISP1Q96F81 1524 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 TRAV17A0A0B4J275 112 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 TCRBV4S1A1TA0A5B7 111 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 TFF1P04155 84 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 POLR2JP52435 117 aaKnown RBP2.14□□□□□ -2.07
CCDC50-203ENST00000460064 SEC11AP67812 179 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 LINC00299Q6ZSB3 139 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 SPCS1Q9Y6A9 102 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 TOPAZ1Q8N9V7 1692 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.14□□□□□ -2.07
CCDC50-203ENST00000460064 SNRNP200O75643 2136 aaKnown RBP2.14□□□□□ -2.07
CCDC50-203ENST00000460064 ANK1P16157 1881 aa2.14□□□□□ -2.07
CCDC50-203ENST00000460064 SCN3AQ9NY46 2000 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 LRP5O75197 1615 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 EML5Q05BV3 1969 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 HCG22E2RYF7 251 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 CCL16O15467 120 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 IGLC2P0DOY2 106 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 IGLC3P0DOY3 106 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 GNG11P61952 73 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 ADIRFQ15847 76 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 LYPD5Q6UWN5 251 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 SERP2Q8N6R1 65 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 SPTSSBQ8NFR3 76 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 OR10AG1Q8NH19 301 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 SPACA4Q8TDM5 124 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 PPDPFLQ8WWR9 84 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 CACFD1Q9UGQ2 172 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 RABAC1Q9UI14 185 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 NLRP1Q9C000 1473 aa2.13□□□□□ -2.07
CCDC50-203ENST00000460064 MUC4Q99102 2169 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 PLXNA2O75051 1894 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 TRPM7Q96QT4 1865 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 PLXNA4Q9HCM2 1894 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 DAPK1P53355 1430 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms