RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MANBALQ9NQG1 85 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 COX11Q9Y6N1 276 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 IGHV3-73A0A0B4J1V6 119 aa6.72□□□□□ -1.33
HDLBP-228ENST00000459788 PSCAO43653 123 aa6.72□□□□□ -1.33
HDLBP-228ENST00000459788 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
HDLBP-228ENST00000459788 TNFRSF18Q9Y5U5 241 aa6.72□□□□□ -1.33
HDLBP-228ENST00000459788 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
HDLBP-228ENST00000459788 LRCOL1A6NCL2 159 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 SMLR1H3BR10 107 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 M0R036 132 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 C1QBP02746 253 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 OR5AL1P0C617 328 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 Q6ZSN1 163 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 TMUB2Q71RG4 321 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 OR10G8Q8NGN5 311 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 C11orf52Q96A22 123 aa6.71□□□□□ -1.34
HDLBP-228ENST00000459788 SSBP4Q9BWG4 385 aaPredicted RBP6.71□□□□□ -1.34
HDLBP-228ENST00000459788 SNAI2O43623 268 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 RAB4BP61018 213 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 PKIAP61925 76 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 RPL36AP83881 106 aaKnown RBP6.7□□□□□ -1.34
HDLBP-228ENST00000459788 ELOBQ15370 118 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 BAGE2Q86Y30 109 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
HDLBP-228ENST00000459788 RMI2Q96E14 147 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 SAMD10Q9BYL1 202 aa6.7□□□□□ -1.34
HDLBP-228ENST00000459788 TRBV7-3A0A075B6L6 115 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GRIFINA4D1Z8 144 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GAGE12JA6NER3 117 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GCSHP23434 173 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 TAGLN2P37802 199 aaKnown RBP6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GAGE1Q13065 139 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GAGE4Q13068 117 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GAGE5Q13069 117 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 GAGE13Q4V321 117 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 TMEM97Q5BJF2 176 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 TCTE3Q8IZS6 198 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 C14orf178Q8N769 122 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-228ENST00000459788 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-228ENST00000459788 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 JPT2Q9H910 190 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 URGCP-MRPS24S4R325 110 aa6.69□□□□□ -1.34
HDLBP-228ENST00000459788 SCO2A0A1W2PP80 73 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 M0R381 172 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 PDE6DO43924 150 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 IGHV3-30P01768 117 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 IGHV3-30-5P0DP03 117 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 SULT1A2P50226 295 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 RPS20P60866 119 aaKnown RBP6.68□□□□□ -1.34
HDLBP-228ENST00000459788 UBE2D3P61077 147 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 UBE2D2P62837 147 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 FAM74A4Q5TZK3 123 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 PRR27Q6MZM9 219 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 NIT1Q86X76 327 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 Q8N814 137 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 BIN3Q9NQY0 253 aa6.68□□□□□ -1.34
HDLBP-228ENST00000459788 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
HDLBP-228ENST00000459788 IFNA1P01562 189 aa6.67□□□□□ -1.34
HDLBP-228ENST00000459788 RPL35P42766 123 aaKnown RBP6.67□□□□□ -1.34
HDLBP-228ENST00000459788 XGP55808 180 aa6.67□□□□□ -1.34
HDLBP-228ENST00000459788 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
HDLBP-228ENST00000459788 SLC51BQ86UW2 128 aa6.67□□□□□ -1.34
HDLBP-228ENST00000459788 VPS13BQ7Z7G8 4022 aa6.67□□□□□ -1.34
HDLBP-228ENST00000459788 A0A087WWL8 130 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 TMSB15BA0A087X1C1 80 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 XKRY2A2RUG3 117 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 EPM2AB3EWF7 344 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 CCL20P78556 96 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 MEF2BQ02080 365 aaPredicted RBP6.66□□□□□ -1.34
HDLBP-228ENST00000459788 Q0VG73 95 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 SPANXN1Q5VSR9 72 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 ATRAIDQ6UW56 229 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 OR10AG1Q8NH19 301 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 Q9HAA7 133 aa6.66□□□□□ -1.34
HDLBP-228ENST00000459788 A0A087WX48 190 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 TRBV6-8A0A0A6YYG3 113 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 F2Z2F3 143 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 CACNG7P62955 275 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 WDR73Q6P4I2 378 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.34
HDLBP-228ENST00000459788 FRZBQ92765 325 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 DAZAP1Q96EP5 407 aaKnown RBP6.65□□□□□ -1.34
HDLBP-228ENST00000459788 AP1S3Q96PC3 154 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.34
HDLBP-228ENST00000459788 GNG13Q9P2W3 67 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 Q9UF83 564 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
HDLBP-228ENST00000459788 A0A1B0GV50 99 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 C19orf71A6NCJ1 209 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 RBFOX3A6NFN3 312 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 H7C1H1 209 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 IGLC6P0CF74 106 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 SMIM17P0DL12 118 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 GNG4P50150 75 aa6.64□□□□□ -1.35
HDLBP-228ENST00000459788 RPL19P84098 196 aaKnown RBP6.64□□□□□ -1.35
HDLBP-228ENST00000459788 ZNF56Q15929 161 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms