RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 Q0VG73 95 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 DAZ2Q13117 558 aaKnown RBP4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 C1orf158Q8N1D5 194 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 NOP10Q9NPE3 64 aaKnown RBP4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 SCRT2Q9NQ03 307 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 AP5S1Q9NUS5 200 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 C19orf73Q9NVV2 129 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 C11orf21Q9P2W6 132 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 TP53TG3Q9ULZ0 132 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 TP53TG1Q9Y2A0 90 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 NACAE9PAV3 2078 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 JMJD1CQ15652 2540 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 SETXQ7Z333 2677 aaKnown RBP4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 A0A087WWL8 130 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 LOC389332A0A1B0GUA5 103 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 GAGE12BA1L429 117 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RBMY1BA6NDE4 496 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RBMY1EA6NEQ0 496 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 G3V4G9 280 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 VCYO14598 125 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 GAGE7O76087 117 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RBMY1DP0C7P1 496 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 DEFB130BP0DP73 79 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 DEFB130AP0DP74 79 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 SAMD5Q5TGI4 173 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 ZFP2Q6ZN57 461 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 GATD1Q8NB37 220 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RASL10AQ92737 203 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RPL36ALQ969Q0 106 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 RNF183Q96D59 192 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 DNAJC30Q96LL9 226 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 MDFIQ99750 246 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 SPATA25Q9BR10 227 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 C20orf78Q9BR46 151 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 ALKBH7Q9BT30 221 aaPredicted RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 NIT2Q9NQR4 276 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 MRPL16Q9NX20 251 aaKnown RBP4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 MSRB1Q9NZV6 116 aa4.25□□□□□ -1.73
RNU1-88P-201ENST00000459274 TRAV4A0A0B4J268 109 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 TNFRSF6BO95407 300 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 FRMD6-AS1P0C7T7 363 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 AMTP48728 403 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 Q6ZQT7 251 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 NIT1Q86X76 327 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 MRAPQ8TCY5 172 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 RNASE8Q8TDE3 154 aaKnown RBP4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 OVOL2Q9BRP0 275 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 HSPB8Q9UJY1 196 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 MUC4Q99102 2169 aa4.24□□□□□ -1.73
RNU1-88P-201ENST00000459274 SETD2Q9BYW2 2564 aaPredicted RBP4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 TEP1Q99973 2627 aaKnown RBP4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 IGHV3-73A0A0B4J1V6 119 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 C20orf202A1L168 122 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 NXPH4O95158 308 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 ATP5G1P05496 136 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 FABP4P15090 132 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 HOXA5P20719 270 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 KRTAP10-11P60412 298 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 SUMO2P61956 95 aaKnown RBP4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 S100A12P80511 92 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 LAGE3Q14657 143 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 KRTAP21-3Q3LHN1 58 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 TMEM97Q5BJF2 176 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 PAPPA-AS1Q5QFB9 102 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 SH2D6Q7Z4S9 175 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 C11orf72Q8NBR9 251 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 CSNK1G2-AS1Q8NCQ2 148 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 C18orf32Q8TCD1 76 aa4.23□□□□□ -1.73
RNU1-88P-201ENST00000459274 TRBV10-1A0A0K0K1A3 114 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 C5orf52A6NGY3 159 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 I3L3M4 83 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 UBE2L6O14933 153 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 RS1O15537 224 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 SERF1AO75920 110 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 NCR2O95944 276 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 NUDT3O95989 172 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 RBMY1A1P0DJD3 496 aaKnown RBP4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 RBMY1CP0DJD4 496 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 BTF3P20290 206 aaKnown RBP4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 IFI27P40305 119 aaPredicted RBP4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 COTL1Q14019 142 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 RBMY1FQ15415 496 aaKnown RBP4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 RHOHQ15669 191 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 PDZD11Q5EBL8 140 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms