RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LINC00305Q7Z4B0 112 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 MORN4Q8NDC4 146 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 SMIM7Q9BQ49 75 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 ATG5Q9H1Y0 275 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 LAMTOR2Q9Y2Q5 125 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 MYH3P11055 1940 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 PCNTO95613 3336 aa-0.47□□□□□ -2.48
SCARNA18-201ENST00000459004 ATMQ13315 3056 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 S100A11P31949 105 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 SRP9P49458 86 aaKnown RBP-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 RBM3P98179 157 aaKnown RBP-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 ESPL1Q14674 2120 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 IDO2Q6ZQW0 420 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 OR51A4Q8NGJ6 313 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 SPRR2FQ96RM1 72 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 DNAH12Q6ZR08 3092 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 USP34Q70CQ2 3546 aa-0.48□□□□□ -2.49
SCARNA18-201ENST00000459004 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 TRAV13-1A0A0B4J241 112 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 SLC25A4P12235 298 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 SERPINB1P30740 379 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 SDC4P31431 198 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 IQCJQ1A5X6 159 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 TEX29Q8N6K0 151 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 LXNQ9BS40 222 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 DMDP11532 3685 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 MYO7AQ13402 2215 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 VPS13CQ709C8 3753 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 WDR97A6NE52 1622 aa-0.49□□□□□ -2.49
SCARNA18-201ENST00000459004 C2CD3Q4AC94 2353 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 TRBV7-6A0A0J9YX20 115 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 C10orf142B7Z368 130 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 F2Z2F3 143 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 CCKP06307 115 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 LSM3P62310 102 aaKnown RBP-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 BLCAPP62952 87 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 MRPS15P82914 257 aaKnown RBP-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 LELP1Q5T871 98 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 DCUN1D2Q6PH85 259 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 PTPRGP23470 1445 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 DNAH14Q0VDD8 3507 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 COL14A1Q05707 1796 aaKnown RBP-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 TANC2Q9HCD6 1990 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 WNK2Q9Y3S1 2297 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 CNOT1A5YKK6 2376 aaKnown RBP-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 WNK1Q9H4A3 2382 aa-0.5□□□□□ -2.49
SCARNA18-201ENST00000459004 TRBV10-1A0A0K0K1A3 114 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 MAP1LC3B2A6NCE7 125 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 C9JAW5 83 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 PPP5D1E7EU14 171 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 H3BMG7 143 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 LRP5O75197 1615 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 CRYGSP22914 178 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 BASP1P80723 227 aaKnown RBP-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 CDK13Q14004 1512 aaKnown RBP-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 UNQ5815/PRO19632Q6UWF5 114 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 OR5A2Q8NGI9 324 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 BOLA2Q9H3K6 86 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 COA4Q9NYJ1 87 aa-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 SPTBN5Q9NRC6 3674 aaKnown RBP-0.51□□□□□ -2.49
SCARNA18-201ENST00000459004 WDFY3Q8IZQ1 3526 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 TRAV12-2A0A075B6T6 113 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 TEX49A0A1B0GTD5 131 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 MT1AP04731 61 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 PYYP10082 97 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 C3orf33Q6P1S2 294 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 MT1MQ8N339 61 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 PPP1R1CQ8WVI7 109 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 HOPXQ9BPY8 73 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 BPESC1Q9GZL8 116 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 KIDINS220Q9ULH0 1771 aa-0.52□□□□□ -2.49
SCARNA18-201ENST00000459004 CDH23Q9H251 3354 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 VPS13AQ96RL7 3174 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 PGRMC1O00264 195 aaKnown RBP-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 PFDN1O60925 122 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 MT2AP02795 61 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 ADCYAP1P18509 176 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 CKS2P33552 79 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 POLR2JP52435 117 aaKnown RBP-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 MT1HP80294 61 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 TMEM78Q5T7P6 136 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 STX12Q86Y82 276 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 OR4S1Q8NGB4 309 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 OTOSQ8NHW6 89 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 TMEM141Q96I45 108 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 CCDC32Q9BV29 185 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 F8P00451 2351 aa-0.53□□□□□ -2.49
SCARNA18-201ENST00000459004 MYH1P12882 1939 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 FER1L6Q2WGJ9 1857 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 ROCK1Q13464 1354 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 IGHV1-24A0A0C4DH33 117 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 LOC107984640A0A0U1RRK4 108 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 OR2H2O95918 312 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 FAM107AO95990 144 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 IFNA21P01568 189 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 HBDP02042 147 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 APOC1P02654 83 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 MT1FP04733 61 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 IFITM1P13164 125 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 MT1XP80297 61 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms