RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AKR1D1P51857 326 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 SSTP61278 116 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 Q6ZQT7 251 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 ZNF575Q86XF7 245 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 AMN1Q8IY45 258 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 C18orf32Q8TCD1 76 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 MUC4Q99102 2169 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 D6R8Y8 96 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 ESDP10768 282 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 APOC4P55056 127 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
VPS50-207ENST00000458530 PTH2Q96A98 100 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 CHCHD1Q96BP2 118 aaKnown RBP6.53□□□□□ -1.36
VPS50-207ENST00000458530 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 WWC2-AS2Q96NR7 200 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 SAMD10Q9BYL1 202 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 TP53TG3Q9ULZ0 132 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 U3KQK5 164 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 TENM2Q9NT68 2774 aa6.53□□□□□ -1.36
VPS50-207ENST00000458530 RYR2Q92736 4967 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 KIR2DL5BA0A0G2JN68 375 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 KIR2DL5BA0A0G2JPC4 375 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 M0R2P5 195 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 HSBP1O75506 76 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 SERF1AO75920 110 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 HTN1P15515 57 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 IGLL1P15814 213 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 RPL35AP18077 110 aaKnown RBP6.52□□□□□ -1.37
VPS50-207ENST00000458530 RAB4AP20338 218 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 PMCHP20382 165 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 KIR2DL5AQ8N109 375 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 KIR2DL5BQ8NHK3 375 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 PACRGQ96M98 296 aaPredicted RBP6.52□□□□□ -1.37
VPS50-207ENST00000458530 RCHY1Q96PM5 261 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 MAP1LC3AQ9H492 121 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 GSN-AS1Q9NRJ2 163 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 MSRB1Q9NZV6 116 aa6.52□□□□□ -1.37
VPS50-207ENST00000458530 A8MWV9 139 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 K7EIL1 84 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 RHODO00212 210 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 MGPP08493 103 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 RBMY1A1P0DJD3 496 aaKnown RBP6.51□□□□□ -1.37
VPS50-207ENST00000458530 RBMY1CP0DJD4 496 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 EVI2AP22794 236 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 RBMY1FQ15415 496 aaKnown RBP6.51□□□□□ -1.37
VPS50-207ENST00000458530 ZNF876PQ49A33 203 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
VPS50-207ENST00000458530 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 DEFB125Q8N687 156 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 PRSS3P2Q8NHM4 247 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 TMEM263Q8WUH6 116 aaKnown RBP6.51□□□□□ -1.37
VPS50-207ENST00000458530 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 KRTAP17-1Q9BYP8 105 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 CSTL1Q9H114 145 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 WFDC10AQ9H1F0 79 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 NXT2Q9NPJ8 142 aaKnown RBP6.51□□□□□ -1.37
VPS50-207ENST00000458530 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
VPS50-207ENST00000458530 IGHV3OR16-12A0A075B7B8 117 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 H7C1H1 209 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 FABP4P15090 132 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 AMTP48728 403 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 RRN3P1Q2M238 152 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 C1orf158Q8N1D5 194 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 RNF185Q96GF1 192 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 HIST1H2BLQ99880 126 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 AP5S1Q9NUS5 200 aa6.5□□□□□ -1.37
VPS50-207ENST00000458530 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
VPS50-207ENST00000458530 LINC00614P0C842 121 aa6.49□□□□□ -1.37
VPS50-207ENST00000458530 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
VPS50-207ENST00000458530 IQCJQ1A5X6 159 aa6.49□□□□□ -1.37
VPS50-207ENST00000458530 C14orf178Q8N769 122 aaPredicted RBP6.49□□□□□ -1.37
VPS50-207ENST00000458530 POM121L12Q8N7R1 296 aa6.49□□□□□ -1.37
VPS50-207ENST00000458530 DNAH1Q9P2D7 4330 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 F5H697 171 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 K7EMI3 77 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 NCR2O95944 276 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 NPYP01303 97 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 ZNF56Q15929 161 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 LGALS9BQ3B8N2 356 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 ZNF705AQ6ZN79 300 aaPredicted RBP6.48□□□□□ -1.37
VPS50-207ENST00000458530 NIT1Q86X76 327 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 RNASE8Q8TDE3 154 aaKnown RBP6.48□□□□□ -1.37
VPS50-207ENST00000458530 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
VPS50-207ENST00000458530 PRSS47A8MTI9 375 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 TCAPO15273 167 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 CIDEAO60543 219 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 GIG44P09565 113 aaPredicted RBP6.47□□□□□ -1.37
VPS50-207ENST00000458530 EGFEM1PQ0D2K5 195 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 DAZ2Q13117 558 aaKnown RBP6.47□□□□□ -1.37
VPS50-207ENST00000458530 FAM74A4Q5TZK3 123 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 OR10D4PQ8NGN7 298 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 B9D2Q9BPU9 175 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
VPS50-207ENST00000458530 NACAE9PAV3 2078 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms