RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 C2orf70A6NJV1 201 aa15.13■□□□□ 0.01
SNX27-204ENST00000458013 NFE4Q86UQ8 179 aa15.13■□□□□ 0.01
SNX27-204ENST00000458013 H0Y9J4 135 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 ACYP1P07311 99 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 ADORA2A-AS1P86434 159 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 SMIM20Q8N5G0 67 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 DOCK10Q96BY6 2186 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 DYSFO75923 2080 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 PTH2Q96A98 100 aa15.12■□□□□ 0.01
SNX27-204ENST00000458013 TRAV26-1A0A087WT03 109 aa15.11■□□□□ 0.01
SNX27-204ENST00000458013 IGKV2D-26A0A0A0MRZ7 120 aa15.11■□□□□ 0.01
SNX27-204ENST00000458013 TM2D2Q9BX73 214 aa15.11■□□□□ 0.01
SNX27-204ENST00000458013 UNQ9165/PRO28630Q6UXU0 137 aa15.11■□□□□ 0.01
SNX27-204ENST00000458013 TOMM6Q96B49 74 aa15.11■□□□□ 0.01
SNX27-204ENST00000458013 IL15RAQ13261 267 aa15.1■□□□□ 0.01
SNX27-204ENST00000458013 POU2AF1Q16633 256 aa15.1■□□□□ 0.01
SNX27-204ENST00000458013 IGKV1-17P01599 117 aa15.1■□□□□ 0.01
SNX27-204ENST00000458013 SIRPDQ9H106 197 aa15.1■□□□□ 0.01
SNX27-204ENST00000458013 FANCD2OSQ96PS1 177 aa15.1■□□□□ 0.01
SNX27-204ENST00000458013 RNF138Q8WVD3 245 aa15.1■□□□□ 0.01
SNX27-204ENST00000458013 A0A096LNI7 61 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 LRCOL1A6NCL2 159 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 TRBV7-3A0A075B6L6 115 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 IGKV2-24A0A0C4DH68 120 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 WI2-2373I1.2A0A1W2PRP0 233 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 TEX22C9J3V5 150 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 PIP4P1Q86T03 277 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 MIR7-3HGQ8N6C7 128 aa15.09■□□□□ 0.01
SNX27-204ENST00000458013 DENND4CQ5VZ89 1909 aa15.08■□□□□ 0.01
SNX27-204ENST00000458013 INTS1Q8N201 2190 aaKnown RBP15.08■□□□□ 0
SNX27-204ENST00000458013 Q8N7P7 452 aa15.08■□□□□ 0
SNX27-204ENST00000458013 LINC01545Q5VT33 79 aa15.07■□□□□ 0
SNX27-204ENST00000458013 LYPD6BQ8NI32 183 aa15.07■□□□□ 0
SNX27-204ENST00000458013 KIR2DL5BA0A0G2JN68 375 aa15.07■□□□□ 0
SNX27-204ENST00000458013 KIR2DL5BA0A0G2JPC4 375 aa15.07■□□□□ 0
SNX27-204ENST00000458013 KIR2DL5AQ8N109 375 aa15.07■□□□□ 0
SNX27-204ENST00000458013 SLX1AQ9BQ83 275 aa15.07■□□□□ 0
SNX27-204ENST00000458013 LINC01620Q4KN68 170 aa15.07■□□□□ 0
SNX27-204ENST00000458013 C11orf86A6NJI1 115 aa15.07■□□□□ 0
SNX27-204ENST00000458013 SVIPQ8NHG7 77 aa15.07■□□□□ 0
SNX27-204ENST00000458013 NDUFA1O15239 70 aa15.07■□□□□ 0
SNX27-204ENST00000458013 IGLV2-14P01704 120 aa15.07■□□□□ 0
SNX27-204ENST00000458013 TP73-AS1Q9UF72 201 aa15.06■□□□□ 0
SNX27-204ENST00000458013 RNASE8Q8TDE3 154 aaKnown RBP15.06■□□□□ 0
SNX27-204ENST00000458013 FAM167A-AS1Q96KT0 104 aa15.06■□□□□ 0
SNX27-204ENST00000458013 LOXL1Q08397 574 aaPredicted RBP15.05■□□□□ 0
SNX27-204ENST00000458013 ODF3L1Q8IXM7 274 aa15.05■□□□□ 0
SNX27-204ENST00000458013 NDUFB1O75438 58 aa15.05■□□□□ 0
SNX27-204ENST00000458013 SPAG11BQ08648 103 aa15.05■□□□□ 0
SNX27-204ENST00000458013 SCXQ7RTU7 201 aa15.05■□□□□ -0
SNX27-204ENST00000458013 CRYGBP07316 175 aa15.04■□□□□ -0
SNX27-204ENST00000458013 Q6ZUT4 128 aa15.04■□□□□ -0
SNX27-204ENST00000458013 C10orf105Q8TEF2 133 aa15.04■□□□□ -0
SNX27-204ENST00000458013 ZNF407Q9C0G0 2248 aa15.04■□□□□ -0
SNX27-204ENST00000458013 TANC1Q9C0D5 1861 aa15.04■□□□□ -0
SNX27-204ENST00000458013 TAX1BP3O14907 124 aa15.03■□□□□ -0
SNX27-204ENST00000458013 MP68P56378 58 aa15.03■□□□□ -0
SNX27-204ENST00000458013 KRTAP27-1Q3LI81 207 aa15.03■□□□□ -0
SNX27-204ENST00000458013 LINC01548A6NM66 108 aa15.03■□□□□ -0
SNX27-204ENST00000458013 C4orf3Q8WVX3 66 aa15.02■□□□□ -0
SNX27-204ENST00000458013 ADAMTS9Q9P2N4 1935 aa15.02□□□□□ -0.01
SNX27-204ENST00000458013 TRAV23DV6A0A075B6W5 121 aa15.01□□□□□ -0.01
SNX27-204ENST00000458013 SLPIP03973 132 aa15.01□□□□□ -0.01
SNX27-204ENST00000458013 DIRC1Q969H9 104 aa15.01□□□□□ -0.01
SNX27-204ENST00000458013 FAM110AQ9BQ89 295 aa15.01□□□□□ -0.01
SNX27-204ENST00000458013 COL6A6A6NMZ7 2263 aa15.01□□□□□ -0.01
SNX27-204ENST00000458013 MPLKIPQ8TAP9 179 aa15.01□□□□□ -0.01
SNX27-204ENST00000458013 FOXI1Q12951 378 aa15□□□□□ -0.01
SNX27-204ENST00000458013 CADP27708 2225 aa15□□□□□ -0.01
SNX27-204ENST00000458013 ZDBF2Q9HCK1 2354 aa15□□□□□ -0.01
SNX27-204ENST00000458013 C4orf48Q5BLP8 95 aa15□□□□□ -0.01
SNX27-204ENST00000458013 LENEPQ9Y5L5 61 aa15□□□□□ -0.01
SNX27-204ENST00000458013 ARHGAP21Q5T5U3 1957 aa15□□□□□ -0.01
SNX27-204ENST00000458013 IGKV4-1P06312 121 aa15□□□□□ -0.01
SNX27-204ENST00000458013 H0YGX0 51 aa14.99□□□□□ -0.01
SNX27-204ENST00000458013 OBSL1O75147 1896 aa14.99□□□□□ -0.01
SNX27-204ENST00000458013 A0A0J9YWU9 116 aa14.99□□□□□ -0.01
SNX27-204ENST00000458013 BRK1Q8WUW1 75 aa14.98□□□□□ -0.01
SNX27-204ENST00000458013 LINC00269Q8N2A0 174 aa14.98□□□□□ -0.01
SNX27-204ENST00000458013 ZNF80P51504 273 aaPredicted RBP14.98□□□□□ -0.01
SNX27-204ENST00000458013 ZNF106Q9H2Y7 1883 aaKnown RBP14.98□□□□□ -0.01
SNX27-204ENST00000458013 MLST8Q9BVC4 326 aa14.98□□□□□ -0.01
SNX27-204ENST00000458013 LYPD6Q86Y78 171 aa14.97□□□□□ -0.01
SNX27-204ENST00000458013 PLXNB3Q9ULL4 1909 aa14.97□□□□□ -0.01
SNX27-204ENST00000458013 TCL1BO95988 128 aa14.97□□□□□ -0.01
SNX27-204ENST00000458013 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
SNX27-204ENST00000458013 USF3Q68DE3 2245 aa14.96□□□□□ -0.01
SNX27-204ENST00000458013 A0A1W2PNU3 283 aaPredicted RBP14.96□□□□□ -0.01
SNX27-204ENST00000458013 MAP6D1Q9H9H5 199 aa14.96□□□□□ -0.01
SNX27-204ENST00000458013 E9PLD3 99 aa14.96□□□□□ -0.01
SNX27-204ENST00000458013 ODF1Q14990 250 aa14.96□□□□□ -0.01
SNX27-204ENST00000458013 NACAE9PAV3 2078 aa14.96□□□□□ -0.01
SNX27-204ENST00000458013 MSMPQ1L6U9 139 aa14.96□□□□□ -0.01
SNX27-204ENST00000458013 TRBV10-2A0A0K0K1G8 114 aa14.95□□□□□ -0.02
SNX27-204ENST00000458013 TEN1Q86WV5 123 aa14.95□□□□□ -0.02
SNX27-204ENST00000458013 DNAJC9-AS1A6NH13 148 aa14.95□□□□□ -0.02
SNX27-204ENST00000458013 ATOX1O00244 68 aa14.95□□□□□ -0.02
SNX27-204ENST00000458013 IGF1P05019 195 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms