RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
CHCHD3-204ENST00000457942 H2AFB1P0C5Y9 115 aa10.57□□□□□ -0.72
CHCHD3-204ENST00000457942 ZFP2Q6ZN57 461 aa10.57□□□□□ -0.72
CHCHD3-204ENST00000457942 FAM74A4Q5TZK3 123 aa10.56□□□□□ -0.72
CHCHD3-204ENST00000457942 SLC51BQ86UW2 128 aa10.56□□□□□ -0.72
CHCHD3-204ENST00000457942 MBD3L1Q8WWY6 194 aa10.56□□□□□ -0.72
CHCHD3-204ENST00000457942 ZC2HC1AQ96GY0 325 aa10.56□□□□□ -0.72
CHCHD3-204ENST00000457942 FMC1Q96HJ9 113 aa10.56□□□□□ -0.72
CHCHD3-204ENST00000457942 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
CHCHD3-204ENST00000457942 TMSB15BA0A087X1C1 80 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 GRIFINA4D1Z8 144 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 SH2D1AO60880 128 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 Q6ZSN1 163 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 JPT2Q9H910 190 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 ZFP30Q9Y2G7 519 aa10.55□□□□□ -0.72
CHCHD3-204ENST00000457942 SCO2A0A1W2PP80 73 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 RHODO00212 210 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 AKR1C3P42330 323 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 CCL20P78556 96 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 PIK3CD-AS1Q5SR53 167 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 SAMD10Q9BYL1 202 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
CHCHD3-204ENST00000457942 KRBOX1C9JBD0 128 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 M0R381 172 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 SULT1A2P50226 295 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 LAGE3Q14657 143 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 EIF5AL1Q6IS14 154 aaKnown RBP10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 Q8N3U1 123 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 TM2D2Q9BX73 214 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 GNG13Q9P2W3 67 aa10.53□□□□□ -0.72
CHCHD3-204ENST00000457942 LRCOL1A6NCL2 159 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 CRIP1P50238 77 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 Q8N814 137 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
CHCHD3-204ENST00000457942 HMCN2Q8NDA2 5059 aa10.51□□□□□ -0.73
CHCHD3-204ENST00000457942 A0A087WWC5 75 aa10.51□□□□□ -0.73
CHCHD3-204ENST00000457942 A0A087WWL8 130 aa10.51□□□□□ -0.73
CHCHD3-204ENST00000457942 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
CHCHD3-204ENST00000457942 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
CHCHD3-204ENST00000457942 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
CHCHD3-204ENST00000457942 LTAP01374 205 aa10.5□□□□□ -0.73
CHCHD3-204ENST00000457942 RAB5CP51148 216 aa10.5□□□□□ -0.73
CHCHD3-204ENST00000457942 DNLZQ5SXM8 178 aa10.5□□□□□ -0.73
CHCHD3-204ENST00000457942 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
CHCHD3-204ENST00000457942 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
CHCHD3-204ENST00000457942 ZNF674Q2M3X9 581 aa10.49□□□□□ -0.73
CHCHD3-204ENST00000457942 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
CHCHD3-204ENST00000457942 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
CHCHD3-204ENST00000457942 DAZ4Q86SG3 579 aaKnown RBP10.49□□□□□ -0.73
CHCHD3-204ENST00000457942 DAZ3Q9NR90 486 aaKnown RBP10.49□□□□□ -0.73
CHCHD3-204ENST00000457942 Q9UF83 564 aa10.49□□□□□ -0.73
CHCHD3-204ENST00000457942 TRBV6-1A0A0K0K1D8 114 aa10.48□□□□□ -0.73
CHCHD3-204ENST00000457942 LECT2O14960 151 aa10.48□□□□□ -0.73
CHCHD3-204ENST00000457942 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
CHCHD3-204ENST00000457942 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
CHCHD3-204ENST00000457942 TMEM70Q9BUB7 260 aa10.48□□□□□ -0.73
CHCHD3-204ENST00000457942 RMI2Q96E14 147 aa10.47□□□□□ -0.73
CHCHD3-204ENST00000457942 MANBALQ9NQG1 85 aa10.47□□□□□ -0.73
CHCHD3-204ENST00000457942 TRAV1-1A0A0B4J248 108 aa10.46□□□□□ -0.73
CHCHD3-204ENST00000457942 TEX46H3BTG2 121 aa10.46□□□□□ -0.73
CHCHD3-204ENST00000457942 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
CHCHD3-204ENST00000457942 ZNF56Q15929 161 aa10.46□□□□□ -0.73
CHCHD3-204ENST00000457942 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
CHCHD3-204ENST00000457942 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
CHCHD3-204ENST00000457942 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 A0A087WX48 190 aa10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 S100A9P06702 114 aaKnown RBP10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 RPL19P84098 196 aaKnown RBP10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 WFDC2Q14508 124 aa10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 PRR27Q6MZM9 219 aa10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
CHCHD3-204ENST00000457942 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
CHCHD3-204ENST00000457942 IFNA1P01562 189 aa10.44□□□□□ -0.74
CHCHD3-204ENST00000457942 NIT1Q86X76 327 aa10.44□□□□□ -0.74
CHCHD3-204ENST00000457942 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
CHCHD3-204ENST00000457942 BAALCQ8WXS3 180 aa10.44□□□□□ -0.74
CHCHD3-204ENST00000457942 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
CHCHD3-204ENST00000457942 BCL2P10415 239 aa10.43□□□□□ -0.74
CHCHD3-204ENST00000457942 OR10AG1Q8NH19 301 aa10.43□□□□□ -0.74
CHCHD3-204ENST00000457942 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
CHCHD3-204ENST00000457942 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 RPL35P42766 123 aaKnown RBP10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 SSTP61278 116 aa10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 MEF2BQ02080 365 aaPredicted RBP10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 ELOBQ15370 118 aa10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 C11orf52Q96A22 123 aa10.42□□□□□ -0.74
CHCHD3-204ENST00000457942 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms