RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 USP34Q70CQ2 3546 aa12.52□□□□□ -0.4
LSS-205ENST00000457828 REV3LO60673 3130 aa12.52□□□□□ -0.41
LSS-205ENST00000457828 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.41
LSS-205ENST00000457828 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.41
LSS-205ENST00000457828 DSPP15924 2871 aaKnown RBP12.52□□□□□ -0.41
LSS-205ENST00000457828 NPC2P61916 151 aa12.52□□□□□ -0.41
LSS-205ENST00000457828 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
LSS-205ENST00000457828 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
LSS-205ENST00000457828 FGF6P10767 208 aa12.51□□□□□ -0.41
LSS-205ENST00000457828 H3BUA1 57 aa12.51□□□□□ -0.41
LSS-205ENST00000457828 GNRH2O43555 120 aa12.51□□□□□ -0.41
LSS-205ENST00000457828 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
LSS-205ENST00000457828 VCYO14598 125 aa12.5□□□□□ -0.41
LSS-205ENST00000457828 CFAP46Q8IYW2 2715 aa12.5□□□□□ -0.41
LSS-205ENST00000457828 LGALS1P09382 135 aaKnown RBP12.5□□□□□ -0.41
LSS-205ENST00000457828 A6NDX4 124 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 SMR3AQ99954 134 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 ANAPC13Q9BS18 74 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 IGHG2P01859 326 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 IGLC6P0CF74 106 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 SLURP1P55000 103 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 TAL2Q16559 108 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 CLPSL1A2RUU4 121 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 C9JAW5 83 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
LSS-205ENST00000457828 SRSF2Q01130 221 aaKnown RBP12.48□□□□□ -0.41
LSS-205ENST00000457828 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
LSS-205ENST00000457828 CD28P10747 220 aa12.48□□□□□ -0.41
LSS-205ENST00000457828 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
LSS-205ENST00000457828 SDHAF1A6NFY7 115 aa12.47□□□□□ -0.41
LSS-205ENST00000457828 LINC01548A6NM66 108 aa12.47□□□□□ -0.41
LSS-205ENST00000457828 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.41
LSS-205ENST00000457828 FRYQ5TBA9 3013 aa12.46□□□□□ -0.41
LSS-205ENST00000457828 PCSK5Q92824 1860 aa12.46□□□□□ -0.41
LSS-205ENST00000457828 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.42
LSS-205ENST00000457828 UBE2L6O14933 153 aa12.46□□□□□ -0.42
LSS-205ENST00000457828 PMVKQ15126 192 aa12.46□□□□□ -0.42
LSS-205ENST00000457828 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.42
LSS-205ENST00000457828 SPXQ9BT56 116 aa12.46□□□□□ -0.42
LSS-205ENST00000457828 C1QTNF4Q9BXJ3 329 aa12.46□□□□□ -0.42
LSS-205ENST00000457828 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 ATP6V0BQ99437 205 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 A0A096LNJ9 63 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 RBAKDNA6NC62 111 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 Q6YL49 198 aa12.45□□□□□ -0.42
LSS-205ENST00000457828 TMEM86BQ8N661 226 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 USP24Q9UPU5 2620 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
LSS-205ENST00000457828 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 C20orf78Q9BR46 151 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 U3KQK5 164 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 SMAD5-AS1Q9Y6J3 95 aa12.44□□□□□ -0.42
LSS-205ENST00000457828 TRGV4A0A0C4DH28 118 aa12.43□□□□□ -0.42
LSS-205ENST00000457828 AVPP01185 164 aa12.43□□□□□ -0.42
LSS-205ENST00000457828 KLK9Q9UKQ9 250 aa12.43□□□□□ -0.42
LSS-205ENST00000457828 TRGV11A0A075B6L2 103 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 CIRBPQ14011 172 aaKnown RBP12.42□□□□□ -0.42
LSS-205ENST00000457828 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 IGHV4OR15-8A0A075B7B6 117 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 A0A087WW49 117 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 PSMG3-AS1Q96PY0 264 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 GAGE2BQ13066 116 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 GAGE2EQ4V326 116 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 GAGE2DQ9UEU5 116 aa12.42□□□□□ -0.42
LSS-205ENST00000457828 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
LSS-205ENST00000457828 INSP01308 110 aa12.41□□□□□ -0.42
LSS-205ENST00000457828 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
LSS-205ENST00000457828 PTH2Q96A98 100 aa12.41□□□□□ -0.42
LSS-205ENST00000457828 IGF1P05019 195 aa12.41□□□□□ -0.42
LSS-205ENST00000457828 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
LSS-205ENST00000457828 ADARB2-AS1A8MUL3 147 aa12.41□□□□□ -0.42
LSS-205ENST00000457828 RPL39P62891 51 aaKnown RBP12.41□□□□□ -0.42
LSS-205ENST00000457828 J3QQQ9 107 aa12.4□□□□□ -0.42
LSS-205ENST00000457828 PRO1854Q9UHT4 67 aa12.4□□□□□ -0.42
LSS-205ENST00000457828 LY6LH3BQJ8 138 aa12.4□□□□□ -0.42
LSS-205ENST00000457828 MRGPRG-AS1Q2M3A8 158 aa12.4□□□□□ -0.42
LSS-205ENST00000457828 DEFB130BP0DP73 79 aa12.4□□□□□ -0.42
LSS-205ENST00000457828 DEFB130AP0DP74 79 aa12.4□□□□□ -0.42
LSS-205ENST00000457828 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 BAALCQ8WXS3 180 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 ZNF48Q96MX3 618 aaPredicted RBP12.39□□□□□ -0.43
LSS-205ENST00000457828 RAI1Q7Z5J4 1906 aaPredicted RBP12.39□□□□□ -0.43
LSS-205ENST00000457828 UFSP1Q6NVU6 142 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 AGRNO00468 2067 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 Q6ZQT7 251 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 TM2D2Q9BX73 214 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
LSS-205ENST00000457828 TRBV20-1A0A075B6N2 111 aa12.38□□□□□ -0.43
LSS-205ENST00000457828 E9PLD3 99 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms