RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 GNRH2O43555 120 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 VPREB3Q9UKI3 123 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 HHLA3Q9XRX5 114 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 NUP210Q8TEM1 1887 aaPredicted RBP3.85□□□□□ -1.79
PCDH9-203ENST00000456367 C1orf195Q5TG92 126 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 C20orf197Q8N268 126 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 ZNRF2Q8NHG8 242 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 DEFB104AQ8WTQ1 72 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 RNF185Q96GF1 192 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 LYNX1G3V0Z9 82 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 PROP1O75360 226 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 LYNX1P0DP58 116 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 C10orf105Q8TEF2 133 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 MRPL36Q9P0J6 103 aaKnown RBP3.85□□□□□ -1.79
PCDH9-203ENST00000456367 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
PCDH9-203ENST00000456367 IGHV4-4A0A075B6R2 117 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 USP17L23D6RBM5 183 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 COL8A2P25067 703 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 DSCR9P59020 149 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 SPINK13Q1W4C9 94 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 NFE4Q86UQ8 179 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 LYRM9A8MSI8 78 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 RPL39P62891 51 aaKnown RBP3.84□□□□□ -1.79
PCDH9-203ENST00000456367 PRB3Q04118 309 aaPredicted RBP3.84□□□□□ -1.79
PCDH9-203ENST00000456367 LY6DQ14210 128 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 DIAPH2-AS1Q14236 149 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 LECT2O14960 151 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 MP68P56378 58 aa3.84□□□□□ -1.79
PCDH9-203ENST00000456367 TRBV6-5A0A0K0K1A5 114 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 TRBV7-7A0A0K0K1E9 115 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 IGLV2-11P01706 119 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 SAA4P35542 130 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 PIP4P2Q8N4L2 257 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 COX7B2Q8TF08 81 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 TMEM263Q8WUH6 116 aaKnown RBP3.84□□□□□ -1.8
PCDH9-203ENST00000456367 UPK3BQ9BT76 320 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 SPRY4Q9C004 299 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 CDIP1Q9H305 208 aa3.84□□□□□ -1.8
PCDH9-203ENST00000456367 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 FUSP35637 526 aaKnown RBP eCLIP3.83□□□□□ -1.8
PCDH9-203ENST00000456367 FAM19A5Q7Z5A7 132 aaPredicted RBP3.83□□□□□ -1.8
PCDH9-203ENST00000456367 FANCD2OSQ96PS1 177 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 ODF3Q96PU9 254 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 ABCA7Q8IZY2 2146 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 TRAV12-2A0A075B6T6 113 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 E7EQL1 145 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 TRBV12-3P01733 135 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 ZNF22P17026 224 aaPredicted RBP3.83□□□□□ -1.8
PCDH9-203ENST00000456367 KLK9Q9UKQ9 250 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 K7EMT4 169 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 IGLV1-47P01700 117 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 DEFB131AP59861 70 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 DEFB123Q8N688 67 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 CCL19Q99731 98 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 ASXL3Q9C0F0 2248 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 NDUFA1O15239 70 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 CRIP1P50238 77 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 ZNF80P51504 273 aaPredicted RBP3.83□□□□□ -1.8
PCDH9-203ENST00000456367 TIRAPP58753 221 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 SDIM1Q6ZPB5 146 aa3.83□□□□□ -1.8
PCDH9-203ENST00000456367 ATRXP46100 2492 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 A0A087WW49 117 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 H7C423 109 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 NXPH4O95158 308 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 DAD1P61803 113 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 NREPQ16612 68 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 NRACQ8N912 160 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 PKIGQ9Y2B9 76 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 TRAV23DV6A0A075B6W5 121 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 PRAC2D3DTV9 90 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 H3BUX3 64 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 GATA3P23771 443 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 C14orf132Q9NPU4 83 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 A0A0G2JNJ9 132 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 DKK4Q9UBT3 224 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 Q9UFV3 132 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 ADAMTS9Q9P2N4 1935 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 PTPRZ1P23471 2315 aaPredicted RBP3.82□□□□□ -1.8
PCDH9-203ENST00000456367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.82□□□□□ -1.8
PCDH9-203ENST00000456367 TRBV27A0A0K0K1C4 114 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 IGKV2-29A2NJV5 120 aaPredicted RBP3.82□□□□□ -1.8
PCDH9-203ENST00000456367 G3V318 75 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 CDK2AP2O75956 126 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 RETNQ9HD89 108 aa3.82□□□□□ -1.8
PCDH9-203ENST00000456367 NCOA6Q14686 2063 aaPredicted RBP3.81□□□□□ -1.8
PCDH9-203ENST00000456367 E7EUB6 86 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 ZNF561-AS1K7EIQ3 104 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
PCDH9-203ENST00000456367 TMEM131Q92545 1883 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 IGHV7-81A0A0B4J1V7 117 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 TRBV10-1A0A0K0K1A3 114 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 BLCAPP62952 87 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 IGFL3Q6UXB1 125 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms