RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 OR11H4Q8NGC9 324 aa14.8□□□□□ -0.04
PTPRA-208ENST00000455631 FAM240BA0A1B0GVZ2 78 aa14.79□□□□□ -0.04
PTPRA-208ENST00000455631 ODF1Q14990 250 aa14.79□□□□□ -0.04
PTPRA-208ENST00000455631 MIAQ16674 131 aa14.79□□□□□ -0.04
PTPRA-208ENST00000455631 TRBV7-3A0A075B6L6 115 aa14.78□□□□□ -0.04
PTPRA-208ENST00000455631 TRBV6-8A0A0A6YYG3 113 aa14.78□□□□□ -0.04
PTPRA-208ENST00000455631 TRBV10-1A0A0K0K1A3 114 aa14.78□□□□□ -0.04
PTPRA-208ENST00000455631 DPH3Q96FX2 82 aa14.78□□□□□ -0.04
PTPRA-208ENST00000455631 B4DEV8 164 aa14.77□□□□□ -0.05
PTPRA-208ENST00000455631 CIRBPQ14011 172 aaKnown RBP14.77□□□□□ -0.05
PTPRA-208ENST00000455631 EPDR1Q9UM22 224 aa14.77□□□□□ -0.05
PTPRA-208ENST00000455631 FABP5P3A8MUU1 101 aa14.76□□□□□ -0.05
PTPRA-208ENST00000455631 ARMS2P0C7Q2 107 aa14.76□□□□□ -0.05
PTPRA-208ENST00000455631 CDC34P49427 236 aaPredicted RBP14.76□□□□□ -0.05
PTPRA-208ENST00000455631 SUMO1P63165 101 aaKnown RBP14.76□□□□□ -0.05
PTPRA-208ENST00000455631 CYCSP99999 105 aaKnown RBP14.76□□□□□ -0.05
PTPRA-208ENST00000455631 CLPSL2Q6UWE3 100 aa14.76□□□□□ -0.05
PTPRA-208ENST00000455631 PPP1R1CQ8WVI7 109 aa14.76□□□□□ -0.05
PTPRA-208ENST00000455631 SFRP2Q96HF1 295 aa14.76□□□□□ -0.05
PTPRA-208ENST00000455631 CHCHD5Q9BSY4 110 aa14.75□□□□□ -0.05
PTPRA-208ENST00000455631 ARL2-SNX15V9GYD0 113 aa14.75□□□□□ -0.05
PTPRA-208ENST00000455631 M0R036 132 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 M0R381 172 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 PTTG1O95997 202 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 STAG3L2P0CL84 134 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 STAG3L3P0CL85 134 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 GCHFRP30047 84 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 WFDC1Q9HC57 220 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 PHLDA3Q9Y5J5 127 aa14.74□□□□□ -0.05
PTPRA-208ENST00000455631 A0A087WYN8 130 aa14.73□□□□□ -0.05
PTPRA-208ENST00000455631 TRAV34A0A0B4J273 112 aa14.73□□□□□ -0.05
PTPRA-208ENST00000455631 GRIFINA4D1Z8 144 aa14.73□□□□□ -0.05
PTPRA-208ENST00000455631 CHTF8P0CG12 524 aa14.73□□□□□ -0.05
PTPRA-208ENST00000455631 RPL12P30050 165 aaKnown RBP14.73□□□□□ -0.05
PTPRA-208ENST00000455631 LINC01600Q96MT4 127 aa14.73□□□□□ -0.05
PTPRA-208ENST00000455631 PHOX2AO14813 284 aa14.72□□□□□ -0.05
PTPRA-208ENST00000455631 PKIAP61925 76 aa14.72□□□□□ -0.05
PTPRA-208ENST00000455631 CLRN3Q8NCR9 226 aa14.72□□□□□ -0.05
PTPRA-208ENST00000455631 KRBOX1C9JBD0 128 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 GAS8-AS1O95177 125 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 PET100P0DJ07 73 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 TPT1P13693 172 aaKnown RBP14.71□□□□□ -0.05
PTPRA-208ENST00000455631 CNBPP62633 177 aaKnown RBP14.71□□□□□ -0.05
PTPRA-208ENST00000455631 DNLZQ5SXM8 178 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 OR10G8Q8NGN5 311 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 SUN5Q8TC36 379 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 RNF185Q96GF1 192 aa14.71□□□□□ -0.05
PTPRA-208ENST00000455631 IGHV3-64A0A075B6Q5 118 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 hDV102S1A0JD36 115 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 MPC2O95563 127 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 H2BFSP57053 126 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 MZT2BQ6NZ67 158 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 KRTAP26-1Q6PEX3 210 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 C7orf33Q8WU49 177 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 RAB24Q969Q5 203 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 PRR34Q9NV39 138 aa14.7□□□□□ -0.06
PTPRA-208ENST00000455631 ZFP82Q8N141 532 aa14.69□□□□□ -0.06
PTPRA-208ENST00000455631 LINC00269Q8N2A0 174 aa14.69□□□□□ -0.06
PTPRA-208ENST00000455631 SPACA4Q8TDM5 124 aa14.69□□□□□ -0.06
PTPRA-208ENST00000455631 Q86TA4 180 aa14.68□□□□□ -0.06
PTPRA-208ENST00000455631 NEXN-AS1Q8NBZ9 246 aa14.68□□□□□ -0.06
PTPRA-208ENST00000455631 CCDC32Q9BV29 185 aa14.68□□□□□ -0.06
PTPRA-208ENST00000455631 TMEM167BQ9NRX6 74 aa14.68□□□□□ -0.06
PTPRA-208ENST00000455631 KIF25-AS1Q9Y6Z4 181 aa14.68□□□□□ -0.06
PTPRA-208ENST00000455631 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.67□□□□□ -0.06
PTPRA-208ENST00000455631 IGLV10-54A0A075B6I4 117 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 TMSB15BA0A087X1C1 80 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 SH2D1AO60880 128 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 CRIP1P50238 77 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 RBX1P62877 108 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 ZNF56Q15929 161 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 AP5S1Q9NUS5 200 aa14.66□□□□□ -0.06
PTPRA-208ENST00000455631 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.65□□□□□ -0.06
PTPRA-208ENST00000455631 CXorf1O96002 111 aa14.65□□□□□ -0.06
PTPRA-208ENST00000455631 GAGE6Q13070 117 aa14.65□□□□□ -0.06
PTPRA-208ENST00000455631 IFNA7P01567 189 aa14.64□□□□□ -0.07
PTPRA-208ENST00000455631 RAB4BP61018 213 aa14.64□□□□□ -0.07
PTPRA-208ENST00000455631 WDR73Q6P4I2 378 aa14.64□□□□□ -0.07
PTPRA-208ENST00000455631 ENKURQ8TC29 256 aa14.64□□□□□ -0.07
PTPRA-208ENST00000455631 PLAC8Q9NZF1 115 aa14.64□□□□□ -0.07
PTPRA-208ENST00000455631 A0A0J9YXV3 536 aa14.63□□□□□ -0.07
PTPRA-208ENST00000455631 FAM162BQ5T6X4 162 aa14.63□□□□□ -0.07
PTPRA-208ENST00000455631 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
PTPRA-208ENST00000455631 A0A1W2PRE2 83 aa14.62□□□□□ -0.07
PTPRA-208ENST00000455631 PEX7O00628 323 aa14.62□□□□□ -0.07
PTPRA-208ENST00000455631 PRR3P79522 188 aaKnown RBP14.62□□□□□ -0.07
PTPRA-208ENST00000455631 GTSF1Q8WW33 167 aa14.62□□□□□ -0.07
PTPRA-208ENST00000455631 SLPIP03973 132 aa14.61□□□□□ -0.07
PTPRA-208ENST00000455631 REG3AQ06141 175 aa14.61□□□□□ -0.07
PTPRA-208ENST00000455631 TMEM97Q5BJF2 176 aa14.61□□□□□ -0.07
PTPRA-208ENST00000455631 PRR27Q6MZM9 219 aa14.61□□□□□ -0.07
PTPRA-208ENST00000455631 LINC01559Q495D7 138 aa14.6□□□□□ -0.07
PTPRA-208ENST00000455631 TRBV25-1A0A075B6N4 114 aa14.59□□□□□ -0.07
PTPRA-208ENST00000455631 UBE2G2P60604 165 aa14.59□□□□□ -0.07
PTPRA-208ENST00000455631 DERL1Q9BUN8 251 aa14.59□□□□□ -0.07
PTPRA-208ENST00000455631 MBP02144 154 aa14.58□□□□□ -0.08
PTPRA-208ENST00000455631 PSMG3Q9BT73 122 aaPredicted RBP14.58□□□□□ -0.08
PTPRA-208ENST00000455631 ACTR3CQ9C0K3 210 aaPredicted RBP14.58□□□□□ -0.08
PTPRA-208ENST00000455631 TRBV6-1A0A0K0K1D8 114 aa14.57□□□□□ -0.08
PTPRA-208ENST00000455631 SSNA1O43805 119 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms