RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SSNA1O43805 119 aa12.08□□□□□ -0.48
MSH6-206ENST00000455383 TRBV10-1A0A0K0K1A3 114 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 A0A1W2PRE2 83 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 B4DEV8 164 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 KRBOX1C9JBD0 128 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 CXorf1O96002 111 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 CRIP1P50238 77 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 SFRP2Q96HF1 295 aa12.07□□□□□ -0.48
MSH6-206ENST00000455383 MBP02144 154 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 ATP6V0CP27449 155 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 UBE2D3P61077 147 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 UBE2D2P62837 147 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 SERF2P84101 59 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 HSD17B11Q8NBQ5 300 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 OR11H4Q8NGC9 324 aa12.06□□□□□ -0.48
MSH6-206ENST00000455383 A0A087WWL8 130 aa12.05□□□□□ -0.48
MSH6-206ENST00000455383 Q86TA4 180 aa12.05□□□□□ -0.48
MSH6-206ENST00000455383 C1orf43Q9BWL3 253 aa12.05□□□□□ -0.48
MSH6-206ENST00000455383 MT1HL1P0DM35 61 aa12.04□□□□□ -0.48
MSH6-206ENST00000455383 KCNIP4Q6PIL6 250 aa12.04□□□□□ -0.48
MSH6-206ENST00000455383 ACTR3CQ9C0K3 210 aaPredicted RBP12.04□□□□□ -0.48
MSH6-206ENST00000455383 TNFSF18Q9UNG2 199 aa12.04□□□□□ -0.48
MSH6-206ENST00000455383 TRBV7-3A0A075B6L6 115 aa12.03□□□□□ -0.48
MSH6-206ENST00000455383 RPL36AP83881 106 aaKnown RBP12.03□□□□□ -0.48
MSH6-206ENST00000455383 OR10G8Q8NGN5 311 aa12.03□□□□□ -0.48
MSH6-206ENST00000455383 RPL36ALQ969Q0 106 aaKnown RBP12.03□□□□□ -0.48
MSH6-206ENST00000455383 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
MSH6-206ENST00000455383 TRBV6-8A0A0A6YYG3 113 aa12.02□□□□□ -0.49
MSH6-206ENST00000455383 GRIFINA4D1Z8 144 aa12.02□□□□□ -0.49
MSH6-206ENST00000455383 USP17L23D6RBM5 183 aa12.02□□□□□ -0.49
MSH6-206ENST00000455383 M0R036 132 aa12.02□□□□□ -0.49
MSH6-206ENST00000455383 DGAT2L7PQ6IED9 249 aa12.02□□□□□ -0.49
MSH6-206ENST00000455383 PHLDA3Q9Y5J5 127 aa12.02□□□□□ -0.49
MSH6-206ENST00000455383 PEX7O00628 323 aa12.01□□□□□ -0.49
MSH6-206ENST00000455383 SH2D1AO60880 128 aa12.01□□□□□ -0.49
MSH6-206ENST00000455383 PRSS1P07477 247 aa12.01□□□□□ -0.49
MSH6-206ENST00000455383 C9orf163Q8N9P6 203 aa12.01□□□□□ -0.49
MSH6-206ENST00000455383 AQP10Q96PS8 301 aa12.01□□□□□ -0.49
MSH6-206ENST00000455383 TMEM262E9PQX1 116 aa12□□□□□ -0.49
MSH6-206ENST00000455383 ZNF726P1Q15940 193 aa12□□□□□ -0.49
MSH6-206ENST00000455383 MPV17L2Q567V2 206 aa12□□□□□ -0.49
MSH6-206ENST00000455383 C15orf54Q8N8G6 183 aa12□□□□□ -0.49
MSH6-206ENST00000455383 HIST1H2BAQ96A08 127 aa12□□□□□ -0.49
MSH6-206ENST00000455383 ZFP30Q9Y2G7 519 aa12□□□□□ -0.49
MSH6-206ENST00000455383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
MSH6-206ENST00000455383 TNXBP22105 4242 aa12□□□□□ -0.49
MSH6-206ENST00000455383 M0R381 172 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 IFNA7P01567 189 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 CRPP02741 224 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
MSH6-206ENST00000455383 ZNF674Q2M3X9 581 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 LINC01559Q495D7 138 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 ZFP82Q8N141 532 aa11.99□□□□□ -0.49
MSH6-206ENST00000455383 LRP2P98164 4655 aa11.98□□□□□ -0.49
MSH6-206ENST00000455383 PANO1I0J062 215 aa11.98□□□□□ -0.49
MSH6-206ENST00000455383 MIAQ16674 131 aa11.98□□□□□ -0.49
MSH6-206ENST00000455383 PRR27Q6MZM9 219 aa11.98□□□□□ -0.49
MSH6-206ENST00000455383 NKX6-2Q9C056 277 aaPredicted RBP11.98□□□□□ -0.49
MSH6-206ENST00000455383 FAM74A7A6NL05 159 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 UBE2G2P60604 165 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 RAB4BP61018 213 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 Q6ZRU5 148 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 PRR34Q9NV39 138 aa11.97□□□□□ -0.49
MSH6-206ENST00000455383 TRBV6-1A0A0K0K1D8 114 aa11.96□□□□□ -0.49
MSH6-206ENST00000455383 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
MSH6-206ENST00000455383 HLA-DQA1P01909 254 aa11.96□□□□□ -0.49
MSH6-206ENST00000455383 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
MSH6-206ENST00000455383 RPL19P84098 196 aaKnown RBP11.96□□□□□ -0.49
MSH6-206ENST00000455383 TMSB15BA0A087X1C1 80 aa11.95□□□□□ -0.5
MSH6-206ENST00000455383 PKIAP61925 76 aa11.95□□□□□ -0.5
MSH6-206ENST00000455383 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
MSH6-206ENST00000455383 FMC1Q96HJ9 113 aa11.95□□□□□ -0.5
MSH6-206ENST00000455383 PTTG1O95997 202 aa11.94□□□□□ -0.5
MSH6-206ENST00000455383 DEFA1P59665 94 aa11.94□□□□□ -0.5
MSH6-206ENST00000455383 DEFA3P59666 94 aa11.94□□□□□ -0.5
MSH6-206ENST00000455383 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
MSH6-206ENST00000455383 LTAP01374 205 aa11.93□□□□□ -0.5
MSH6-206ENST00000455383 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
MSH6-206ENST00000455383 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
MSH6-206ENST00000455383 RPL7L1Q6DKI1 246 aaKnown RBP11.92□□□□□ -0.5
MSH6-206ENST00000455383 ALG5Q9Y673 324 aa11.92□□□□□ -0.5
MSH6-206ENST00000455383 A0A0D9SG52 128 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 CXCL1P09341 107 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 UBE2G1P62253 170 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 CNBPP62633 177 aaKnown RBP11.91□□□□□ -0.5
MSH6-206ENST00000455383 RBX1P62877 108 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 TMEM97Q5BJF2 176 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 Q5BKY6 102 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 OR10AG1Q8NH19 301 aa11.91□□□□□ -0.5
MSH6-206ENST00000455383 ZNF56Q15929 161 aa11.9□□□□□ -0.5
MSH6-206ENST00000455383 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms