RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 Q6ZTC4 211 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 ZNF575Q86XF7 245 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 ZFP82Q8N141 532 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 FER1L6-AS1Q8NA97 138 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 MUC7Q8TAX7 377 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 SCRT2Q9NQ03 307 aa6.21□□□□□ -1.42
SYNE1-214ENST00000454018 TRAV10A0A0B4J240 114 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 FAM231BA6NCW3 169 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 NUPR2A6NF83 97 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 F2Z2F3 143 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 NXPH4O95158 308 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 ATP5G1P05496 136 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 OR10G8Q8NGN5 311 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 GFRA4Q9GZZ7 299 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 CARHSP1Q9Y2V2 147 aaKnown RBP6.2□□□□□ -1.42
SYNE1-214ENST00000454018 V9GYV3 84 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 PPP1R2P9O14990 202 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 GZMBP10144 247 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 C10orf91Q5T1B1 145 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 OR10AG1Q8NH19 301 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 TSKUQ8WUA8 353 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 PHLDA1Q8WV24 401 aaPredicted RBP6.2□□□□□ -1.42
SYNE1-214ENST00000454018 TPPP3Q9BW30 176 aa6.2□□□□□ -1.42
SYNE1-214ENST00000454018 DNAH7Q8WXX0 4024 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 DEFB131BA0A096LNP1 70 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 A8MWV9 139 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 M0R381 172 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 CIDEAO60543 219 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 MT-ND4LP03901 98 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 CACNG7P62955 275 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 SPANXN1Q5VSR9 72 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
SYNE1-214ENST00000454018 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 C3orf84H3BNL1 204 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 RHODO00212 210 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 HTN3P15516 51 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 RNF212Q495C1 297 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 LYZL1Q6UWQ5 148 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 OR4C5Q8NGB2 326 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 BORCS7Q96B45 105 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 AP1S3Q96PC3 154 aa6.18□□□□□ -1.42
SYNE1-214ENST00000454018 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 F5H768 121 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 RS1O15537 224 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 VPREB1P12018 145 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 FOXA3P55318 350 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-214ENST00000454018 RHEBQ15382 184 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 CEMP1Q6PRD7 247 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-214ENST00000454018 ZFP2Q6ZN57 461 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 FAM210BQ96KR6 192 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 KLK5Q9Y337 293 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-214ENST00000454018 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
SYNE1-214ENST00000454018 TRGV4A0A0C4DH28 118 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 SMIM27A0A1W2PRY6 76 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 IGHV3-53P01767 116 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 APOC3P02656 99 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 TRGC1P0CF51 173 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 SLAQ13239 276 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 XP32Q5T750 250 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 SVBPQ8N300 66 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 POM121L12Q8N7R1 296 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 ZNF479Q96JC4 524 aa6.16□□□□□ -1.42
SYNE1-214ENST00000454018 MUC21A0A0G2JKD1 596 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 MUC21A0A140T8X8 626 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 A0A1B0GUT8 65 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 SNAPINO95295 136 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 SMIM17P0DL12 118 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 HOXA5P20719 270 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 NTF3P20783 257 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 FAM74A4Q5TZK3 123 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 SLC7A5P1Q8MH63 180 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 NUP35Q8NFH5 326 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 PGLYRP4Q96LB8 373 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 PRO0255Q9UI72 69 aa6.15□□□□□ -1.42
SYNE1-214ENST00000454018 A0A087WWC5 75 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 H3BNG1 76 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 TCTAP57738 103 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 FHL2Q14192 279 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 TWIST1Q15672 202 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 CASC10Q5T4H9 136 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 UFSP1Q6NVU6 142 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 C15orf53Q8NAA6 179 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 JPT2Q9H910 190 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 TMEM242Q9NWH2 141 aa6.15□□□□□ -1.43
SYNE1-214ENST00000454018 TRAV26-1A0A087WT03 109 aa6.14□□□□□ -1.43
SYNE1-214ENST00000454018 A0A1B0GW15 77 aa6.14□□□□□ -1.43
SYNE1-214ENST00000454018 C7orf77A4D0Y5 90 aa6.14□□□□□ -1.43
SYNE1-214ENST00000454018 IGLL5B9A064 214 aa6.14□□□□□ -1.43
SYNE1-214ENST00000454018 CRYGDP07320 174 aa6.14□□□□□ -1.43
SYNE1-214ENST00000454018 GATA1P15976 413 aaPredicted RBP6.14□□□□□ -1.43
SYNE1-214ENST00000454018 SSTP61278 116 aa6.14□□□□□ -1.43
SYNE1-214ENST00000454018 RIGQ13278 110 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms