RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 RAB5CP51148 216 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 MANBALQ9NQG1 85 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 M0R381 172 aa11.48□□□□□ -0.57
TNFRSF4-202ENST00000453580 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
TNFRSF4-202ENST00000453580 KCNIP4Q6PIL6 250 aa11.48□□□□□ -0.57
TNFRSF4-202ENST00000453580 BAGE2Q86Y30 109 aa11.48□□□□□ -0.57
TNFRSF4-202ENST00000453580 GCSHP23434 173 aa11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 Q6ZSN1 163 aa11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 TMUB2Q71RG4 321 aa11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 RMI2Q96E14 147 aa11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 JPT2Q9H910 190 aa11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 Q9HAA7 133 aa11.47□□□□□ -0.57
TNFRSF4-202ENST00000453580 TMSB15BA0A087X1C1 80 aa11.46□□□□□ -0.57
TNFRSF4-202ENST00000453580 ELOBQ15370 118 aa11.46□□□□□ -0.57
TNFRSF4-202ENST00000453580 CHCHD7Q9BUK0 85 aa11.46□□□□□ -0.57
TNFRSF4-202ENST00000453580 SAMD10Q9BYL1 202 aa11.46□□□□□ -0.57
TNFRSF4-202ENST00000453580 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
TNFRSF4-202ENST00000453580 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
TNFRSF4-202ENST00000453580 A0A1B0GV50 99 aa11.45□□□□□ -0.58
TNFRSF4-202ENST00000453580 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
TNFRSF4-202ENST00000453580 C14orf178Q8N769 122 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF4-202ENST00000453580 A0A087WWL8 130 aa11.44□□□□□ -0.58
TNFRSF4-202ENST00000453580 RAB4BP61018 213 aa11.44□□□□□ -0.58
TNFRSF4-202ENST00000453580 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
TNFRSF4-202ENST00000453580 KRTAP4-5Q9BYR2 181 aa11.44□□□□□ -0.58
TNFRSF4-202ENST00000453580 TRBV7-3A0A075B6L6 115 aa11.43□□□□□ -0.58
TNFRSF4-202ENST00000453580 LRCOL1A6NCL2 159 aa11.43□□□□□ -0.58
TNFRSF4-202ENST00000453580 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
TNFRSF4-202ENST00000453580 OR5AL1P0C617 328 aa11.43□□□□□ -0.58
TNFRSF4-202ENST00000453580 SPANXN1Q5VSR9 72 aa11.43□□□□□ -0.58
TNFRSF4-202ENST00000453580 Q8N814 137 aa11.43□□□□□ -0.58
TNFRSF4-202ENST00000453580 PCLOQ9Y6V0 5065 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 A0A087WX48 190 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 IFNA1P01562 189 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 SMIM17P0DL12 118 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 PKIAP61925 76 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 DAZAP1Q96EP5 407 aaKnown RBP11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 SMIM12Q96EX1 92 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 TMEM70Q9BUB7 260 aa11.42□□□□□ -0.58
TNFRSF4-202ENST00000453580 SNAI2O43623 268 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 RPL35P42766 123 aaKnown RBP11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 ZNF56Q15929 161 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 PRR27Q6MZM9 219 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 OR10G8Q8NGN5 311 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 FRZBQ92765 325 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 GNG13Q9P2W3 67 aa11.41□□□□□ -0.58
TNFRSF4-202ENST00000453580 XKRY2A2RUG3 117 aa11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 PDE6DO43924 150 aa11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 RPS20P60866 119 aaKnown RBP11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 NIT1Q86X76 327 aa11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 C11orf52Q96A22 123 aa11.4□□□□□ -0.58
TNFRSF4-202ENST00000453580 C1QBP02746 253 aa11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 UBE2D3P61077 147 aa11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 UBE2D2P62837 147 aa11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 Q0VG73 95 aa11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 DAZ4Q86SG3 579 aaKnown RBP11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 TCTE3Q8IZS6 198 aa11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 DAZ3Q9NR90 486 aaKnown RBP11.39□□□□□ -0.59
TNFRSF4-202ENST00000453580 RYR1P21817 5038 aa11.38□□□□□ -0.59
TNFRSF4-202ENST00000453580 F5H697 171 aa11.38□□□□□ -0.59
TNFRSF4-202ENST00000453580 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.59
TNFRSF4-202ENST00000453580 SULT1A2P50226 295 aa11.38□□□□□ -0.59
TNFRSF4-202ENST00000453580 RPL19P84098 196 aaKnown RBP11.38□□□□□ -0.59
TNFRSF4-202ENST00000453580 AP1S3Q96PC3 154 aa11.38□□□□□ -0.59
TNFRSF4-202ENST00000453580 XGP55808 180 aa11.37□□□□□ -0.59
TNFRSF4-202ENST00000453580 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF4-202ENST00000453580 SLC51BQ86UW2 128 aa11.37□□□□□ -0.59
TNFRSF4-202ENST00000453580 Q8N976 141 aa11.37□□□□□ -0.59
TNFRSF4-202ENST00000453580 Q9UF83 564 aa11.37□□□□□ -0.59
TNFRSF4-202ENST00000453580 TRBV6-8A0A0A6YYG3 113 aa11.36□□□□□ -0.59
TNFRSF4-202ENST00000453580 RBFOX3A6NFN3 312 aa11.36□□□□□ -0.59
TNFRSF4-202ENST00000453580 H7C1H1 209 aa11.36□□□□□ -0.59
TNFRSF4-202ENST00000453580 GNG4P50150 75 aa11.36□□□□□ -0.59
TNFRSF4-202ENST00000453580 CCL20P78556 96 aa11.36□□□□□ -0.59
TNFRSF4-202ENST00000453580 HSPG2P98160 4391 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 F2Z2F3 143 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 FAM229AH3BQW9 127 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 CACNG7P62955 275 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 KLK12Q9UKR0 248 aa11.35□□□□□ -0.59
TNFRSF4-202ENST00000453580 IGKV2D-24A0A075B6R9 120 aa11.34□□□□□ -0.59
TNFRSF4-202ENST00000453580 TMEM262E9PQX1 116 aa11.34□□□□□ -0.59
TNFRSF4-202ENST00000453580 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
TNFRSF4-202ENST00000453580 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
TNFRSF4-202ENST00000453580 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
TNFRSF4-202ENST00000453580 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms