RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 FAM231BA6NCW3 169 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 F8W036 122 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 CRYGDP07320 174 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 MRPL23Q16540 153 aaKnown RBP10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 LINC00476Q8WZB0 136 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 V9GYV3 84 aa10.19□□□□□ -0.78
NCKIPSD-207ENST00000453349 TRGC1P0CF51 173 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 GYPEP15421 78 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 CTRLP40313 264 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 RHOHQ15669 191 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 TWIST1Q15672 202 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 UFSP1Q6NVU6 142 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 UBE2DNLQ8IWF7 75 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 C14orf178Q8N769 122 aaPredicted RBP10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 GTSF1Q8WW33 167 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 AP1S3Q96PC3 154 aa10.18□□□□□ -0.78
NCKIPSD-207ENST00000453349 A0A096LPF7 62 aa10.17□□□□□ -0.78
NCKIPSD-207ENST00000453349 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
NCKIPSD-207ENST00000453349 CCL18P55774 89 aa10.17□□□□□ -0.78
NCKIPSD-207ENST00000453349 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
NCKIPSD-207ENST00000453349 HIGD1CA8MV81 97 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 F5H697 171 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 K7EQD1 137 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 SRIP30626 198 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 RAB4BP61018 213 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 RNF212Q495C1 297 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 SMIM15Q7Z3B0 74 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 SH2D6Q7Z4S9 175 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 SEC11CQ9BY50 192 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 NAT8BQ9UHF3 227 aa10.16□□□□□ -0.78
NCKIPSD-207ENST00000453349 MT-ND4LP03901 98 aa10.15□□□□□ -0.78
NCKIPSD-207ENST00000453349 ZNF56Q15929 161 aa10.15□□□□□ -0.78
NCKIPSD-207ENST00000453349 Q6ZSN1 163 aa10.15□□□□□ -0.78
NCKIPSD-207ENST00000453349 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
NCKIPSD-207ENST00000453349 ANAPC16Q96DE5 110 aa10.15□□□□□ -0.78
NCKIPSD-207ENST00000453349 LOC100131303A0A0U1RQF7 123 aa10.14□□□□□ -0.79
NCKIPSD-207ENST00000453349 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
NCKIPSD-207ENST00000453349 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
NCKIPSD-207ENST00000453349 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
NCKIPSD-207ENST00000453349 MGPP08493 103 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 ADCYAP1P18509 176 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 EVI2AP22794 236 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 RIGQ13278 110 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 ESRGQ1W209 222 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 NUP35Q8NFH5 326 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 KIF25-AS1Q9Y6Z4 181 aa10.13□□□□□ -0.79
NCKIPSD-207ENST00000453349 LYPD5Q6UWN5 251 aa10.12□□□□□ -0.79
NCKIPSD-207ENST00000453349 LINC00588Q9Y4M8 146 aa10.12□□□□□ -0.79
NCKIPSD-207ENST00000453349 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 CSMD3Q7Z407 3707 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 TRBV10-1A0A0K0K1A3 114 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 GAGE12JA6NER3 117 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 GAGE1Q13065 139 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 GAGE4Q13068 117 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 GAGE5Q13069 117 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 ATP6V0E2Q8NHE4 81 aa10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
NCKIPSD-207ENST00000453349 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
NCKIPSD-207ENST00000453349 H7C1H1 209 aa10.1□□□□□ -0.79
NCKIPSD-207ENST00000453349 LINC00315P59091 139 aa10.1□□□□□ -0.79
NCKIPSD-207ENST00000453349 C10orf91Q5T1B1 145 aa10.1□□□□□ -0.79
NCKIPSD-207ENST00000453349 ZNRF2Q8NHG8 242 aa10.1□□□□□ -0.79
NCKIPSD-207ENST00000453349 MRPS16Q9Y3D3 137 aaKnown RBP10.09□□□□□ -0.79
NCKIPSD-207ENST00000453349 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 A0A1B0GW15 77 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 CTDSP1Q9GZU7 261 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 Q9UF83 564 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 TNFRSF18Q9Y5U5 241 aa10.08□□□□□ -0.8
NCKIPSD-207ENST00000453349 S100A8P05109 93 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 DNAJC30Q96LL9 226 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 Q9H8V8 135 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
NCKIPSD-207ENST00000453349 M0QY20 66 aa10.06□□□□□ -0.8
NCKIPSD-207ENST00000453349 TIRAPP58753 221 aa10.06□□□□□ -0.8
NCKIPSD-207ENST00000453349 RASL11AQ6T310 242 aa10.06□□□□□ -0.8
NCKIPSD-207ENST00000453349 FRZBQ92765 325 aa10.06□□□□□ -0.8
NCKIPSD-207ENST00000453349 TENM2Q9NT68 2774 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 CAMPP49913 170 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 UBE2D3P61077 147 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 UBE2D2P62837 147 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 CLRN3Q8NCR9 226 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 IMMP2LQ96T52 175 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 NIT2Q9NQR4 276 aa10.05□□□□□ -0.8
NCKIPSD-207ENST00000453349 IGLV2-18A0A075B6J9 118 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms