RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FHITP49789 147 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 LELP1Q5T871 98 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 COMMD7Q86VX2 200 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 SYT8Q8NBV8 401 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 ZC2HC1AQ96GY0 325 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 TCEAL7Q9BRU2 100 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 PARLQ9H300 379 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 H3BVH4 76 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 M0R036 132 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 SNAPINO95295 136 aa8.69□□□□□ -1.02
CHD3-206ENST00000452447 GRIFINA4D1Z8 144 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 SH2D1AO60880 128 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 ARMS2P0C7Q2 107 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 CRIP1P50238 77 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 GAGE1Q13065 139 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 GAGE4Q13068 117 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 GAGE5Q13069 117 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 DMRTA1Q5VZB9 504 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 Q6ZSN1 163 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 COX8CQ7Z4L0 72 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
CHD3-206ENST00000452447 IBA57-AS1B1ANH7 110 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 IGHV3-30-3P0DP02 117 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 AKR1C3P42330 323 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 DNLZQ5SXM8 178 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 JPT2Q9H910 190 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 Q9HAA7 133 aa8.67□□□□□ -1.02
CHD3-206ENST00000452447 TMSB15BA0A087X1C1 80 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 TRBV6-1A0A0K0K1D8 114 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 RHODO00212 210 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 PAGE4O60829 102 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 LTAP01374 205 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 ZNF674Q2M3X9 581 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
CHD3-206ENST00000452447 EIF5A2Q9GZV4 153 aaKnown RBP8.66□□□□□ -1.02
CHD3-206ENST00000452447 A0A1B0GV50 99 aa8.65□□□□□ -1.02
CHD3-206ENST00000452447 SCO1O75880 301 aa8.65□□□□□ -1.02
CHD3-206ENST00000452447 SSTP61278 116 aa8.65□□□□□ -1.02
CHD3-206ENST00000452447 GNG13Q9P2W3 67 aa8.65□□□□□ -1.02
CHD3-206ENST00000452447 RAB19A4D1S5 217 aa8.65□□□□□ -1.03
CHD3-206ENST00000452447 M0R381 172 aa8.65□□□□□ -1.03
CHD3-206ENST00000452447 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.03
CHD3-206ENST00000452447 NDUFS6O75380 124 aaKnown RBP8.65□□□□□ -1.03
CHD3-206ENST00000452447 S100A9P06702 114 aaKnown RBP8.65□□□□□ -1.03
CHD3-206ENST00000452447 PEA15Q15121 130 aa8.65□□□□□ -1.03
CHD3-206ENST00000452447 LINC01559Q495D7 138 aa8.65□□□□□ -1.03
CHD3-206ENST00000452447 UFSP1Q6NVU6 142 aa8.65□□□□□ -1.03
CHD3-206ENST00000452447 C14orf178Q8N769 122 aaPredicted RBP8.65□□□□□ -1.03
CHD3-206ENST00000452447 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.65□□□□□ -1.03
CHD3-206ENST00000452447 VAX2Q9UIW0 290 aa8.65□□□□□ -1.03
CHD3-206ENST00000452447 FAT1Q14517 4588 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 A0A087WWC5 75 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 A0A087WWL8 130 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 F8W036 122 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 PDE6DO43924 150 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 BCL2P10415 239 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 GCSHP23434 173 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 MEF2BQ02080 365 aaPredicted RBP8.64□□□□□ -1.03
CHD3-206ENST00000452447 LAGE3Q14657 143 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 ZFP82Q8N141 532 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
CHD3-206ENST00000452447 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 PCP4L1A6NKN8 68 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 UQCC3Q6UW78 93 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 Q9UF83 564 aa8.63□□□□□ -1.03
CHD3-206ENST00000452447 TRAV8-3A0A0A6YYJ7 113 aa8.62□□□□□ -1.03
CHD3-206ENST00000452447 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
CHD3-206ENST00000452447 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
CHD3-206ENST00000452447 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
CHD3-206ENST00000452447 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
CHD3-206ENST00000452447 SCO2A0A1W2PP80 73 aa8.61□□□□□ -1.03
CHD3-206ENST00000452447 XGP55808 180 aa8.61□□□□□ -1.03
CHD3-206ENST00000452447 BAGE2Q86Y30 109 aa8.61□□□□□ -1.03
CHD3-206ENST00000452447 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
CHD3-206ENST00000452447 Q8N3U1 123 aa8.61□□□□□ -1.03
CHD3-206ENST00000452447 Q8N814 137 aa8.61□□□□□ -1.03
CHD3-206ENST00000452447 DNAH8Q96JB1 4490 aa8.6□□□□□ -1.03
CHD3-206ENST00000452447 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
CHD3-206ENST00000452447 TMEM250H0YL14 139 aa8.6□□□□□ -1.03
CHD3-206ENST00000452447 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
CHD3-206ENST00000452447 RPL19P84098 196 aaKnown RBP8.6□□□□□ -1.03
CHD3-206ENST00000452447 PRR27Q6MZM9 219 aa8.6□□□□□ -1.03
CHD3-206ENST00000452447 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
CHD3-206ENST00000452447 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
CHD3-206ENST00000452447 C12orf57Q99622 126 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms