RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NTF3P20783 257 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 ZFP2Q6ZN57 461 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 MUC7Q8TAX7 377 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 PHLDA1Q8WV24 401 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-204ENST00000452182 BORCS7Q96B45 105 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 ZNF479Q96JC4 524 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 PGLYRP4Q96LB8 373 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 NACAE9PAV3 2078 aa8.17□□□□□ -1.1
SCN9A-204ENST00000452182 DEFB131BA0A096LNP1 70 aa8.16□□□□□ -1.1
SCN9A-204ENST00000452182 MUC21A0A0G2JKD1 596 aa8.16□□□□□ -1.1
SCN9A-204ENST00000452182 MUC21A0A140T8X8 626 aa8.16□□□□□ -1.1
SCN9A-204ENST00000452182 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
SCN9A-204ENST00000452182 UFSP1Q6NVU6 142 aa8.16□□□□□ -1.1
SCN9A-204ENST00000452182 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 NUPR2A6NF83 97 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 RHODO00212 210 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 CRYGDP07320 174 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 TRGC1P0CF51 173 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 HOXA5P20719 270 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 SLAQ13239 276 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 FHL2Q14192 279 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 AP1S3Q96PC3 154 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 JPT2Q9H910 190 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
SCN9A-204ENST00000452182 IGHV3-53P01767 116 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 TWIST1Q15672 202 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 CEMP1Q6PRD7 247 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-204ENST00000452182 FAM210BQ96KR6 192 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 RPS10P5Q9NQ39 176 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 A0A1B0GW15 77 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 F5H768 121 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 HTN3P15516 51 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 SSTP61278 116 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 RIGQ13278 110 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 SAMD10Q9BYL1 202 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
SCN9A-204ENST00000452182 TRAV9-1A0A075B6T8 112 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 TRGV4A0A0C4DH28 118 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 H3BNG1 76 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 C3orf84H3BNL1 204 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 SMIM17P0DL12 118 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 GATA1P15976 413 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-204ENST00000452182 EVI2AP22794 236 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-204ENST00000452182 KCNIP4Q6PIL6 250 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 ATP5L2Q7Z4Y8 100 aa8.13□□□□□ -1.11
SCN9A-204ENST00000452182 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
SCN9A-204ENST00000452182 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
SCN9A-204ENST00000452182 A0A087WWL8 130 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 CRYBA4P53673 196 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 LINC00315P59091 139 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 FAM74A4Q5TZK3 123 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 BTF3L4Q96K17 158 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 HHLA3Q9XRX5 114 aa8.12□□□□□ -1.11
SCN9A-204ENST00000452182 KLK5Q9Y337 293 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-204ENST00000452182 TRAV26-1A0A087WT03 109 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 IGHV3-73A0A0B4J1V6 119 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 S100A8P05109 93 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 S100PP25815 95 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 TCTAP57738 103 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 RAB4BP61018 213 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 TMEM191AQ9H0A3 160 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 STARD9Q9P2P6 4700 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 HBBP68871 147 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 TMEM88Q6PEY1 159 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 SLC25A29Q8N8R3 303 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 GATD1Q8NB37 220 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
SCN9A-204ENST00000452182 RHOHQ15669 191 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 CASC10Q5T4H9 136 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
SCN9A-204ENST00000452182 RASL11AQ6T310 242 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 ATRAIDQ6UW56 229 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 Q6ZSN1 163 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 C15orf53Q8NAA6 179 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 FRZBQ92765 325 aa8.1□□□□□ -1.11
SCN9A-204ENST00000452182 TRBV10-1A0A0K0K1A3 114 aa8.09□□□□□ -1.11
SCN9A-204ENST00000452182 IGLL5B9A064 214 aa8.09□□□□□ -1.11
SCN9A-204ENST00000452182 PAX4O43316 350 aa8.09□□□□□ -1.11
SCN9A-204ENST00000452182 CAMPP49913 170 aa8.09□□□□□ -1.11
SCN9A-204ENST00000452182 ZFAND6Q6FIF0 208 aa8.09□□□□□ -1.11
SCN9A-204ENST00000452182 F5H697 171 aa8.08□□□□□ -1.12
SCN9A-204ENST00000452182 K7EQD1 137 aa8.08□□□□□ -1.12
SCN9A-204ENST00000452182 ZNF56Q15929 161 aa8.08□□□□□ -1.12
SCN9A-204ENST00000452182 PRADC1Q9BSG0 188 aa8.08□□□□□ -1.12
SCN9A-204ENST00000452182 URGCP-MRPS24S4R325 110 aa8.08□□□□□ -1.12
SCN9A-204ENST00000452182 A0A0J9YY99 117 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 H7C1H1 209 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 MGPP08493 103 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 M0QY20 66 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 S100A1P23297 94 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 ELOBQ15370 118 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 FAM104BQ5XKR9 115 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 SUMO4Q6EEV6 95 aa8.07□□□□□ -1.12
SCN9A-204ENST00000452182 APLNQ9ULZ1 77 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms