RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 Q9UF83 564 aa8.37□□□□□ -1.07
CPSF4-208ENST00000452047 GRIFINA4D1Z8 144 aa8.36□□□□□ -1.07
CPSF4-208ENST00000452047 LRCOL1A6NCL2 159 aa8.36□□□□□ -1.07
CPSF4-208ENST00000452047 UMAD1C9J7I0 102 aa8.36□□□□□ -1.07
CPSF4-208ENST00000452047 PAGE4O60829 102 aa8.36□□□□□ -1.07
CPSF4-208ENST00000452047 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
CPSF4-208ENST00000452047 C14orf178Q8N769 122 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-208ENST00000452047 FAM213BQ8TBF2 198 aa8.36□□□□□ -1.07
CPSF4-208ENST00000452047 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 RHODO00212 210 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 AKR1C3P42330 323 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 GAGE1Q13065 139 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 GAGE4Q13068 117 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 GAGE5Q13069 117 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 Q8N3U1 123 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 SYT8Q8NBV8 401 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 SFT2D1Q8WV19 159 aa8.35□□□□□ -1.07
CPSF4-208ENST00000452047 ZNF471Q9BX82 626 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-208ENST00000452047 FAT1Q14517 4588 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 TMSB15BA0A087X1C1 80 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 XGP55808 180 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 LAGE3Q14657 143 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 ALKAL2Q6UX46 152 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 SFRP2Q96HF1 295 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 MLST8Q9BVC4 326 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 Q9HAA7 133 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
CPSF4-208ENST00000452047 A0A1B0GV50 99 aa8.33□□□□□ -1.08
CPSF4-208ENST00000452047 TPT1P13693 172 aaKnown RBP8.33□□□□□ -1.08
CPSF4-208ENST00000452047 EIF5AP63241 154 aaKnown RBP8.33□□□□□ -1.08
CPSF4-208ENST00000452047 FAM74A4Q5TZK3 123 aa8.33□□□□□ -1.08
CPSF4-208ENST00000452047 UQCC3Q6UW78 93 aa8.33□□□□□ -1.08
CPSF4-208ENST00000452047 A0A087WWL8 130 aa8.32□□□□□ -1.08
CPSF4-208ENST00000452047 TEX46H3BTG2 121 aa8.32□□□□□ -1.08
CPSF4-208ENST00000452047 M0R381 172 aa8.32□□□□□ -1.08
CPSF4-208ENST00000452047 PSCAO43653 123 aa8.32□□□□□ -1.08
CPSF4-208ENST00000452047 S100A9P06702 114 aaKnown RBP8.32□□□□□ -1.08
CPSF4-208ENST00000452047 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
CPSF4-208ENST00000452047 A0A087WWC5 75 aa8.31□□□□□ -1.08
CPSF4-208ENST00000452047 RAB19A4D1S5 217 aa8.31□□□□□ -1.08
CPSF4-208ENST00000452047 CXCL1P09341 107 aa8.31□□□□□ -1.08
CPSF4-208ENST00000452047 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
CPSF4-208ENST00000452047 RPL19P84098 196 aaKnown RBP8.31□□□□□ -1.08
CPSF4-208ENST00000452047 GCSHP23434 173 aa8.3□□□□□ -1.08
CPSF4-208ENST00000452047 EIF5AL1Q6IS14 154 aaKnown RBP8.3□□□□□ -1.08
CPSF4-208ENST00000452047 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
CPSF4-208ENST00000452047 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
CPSF4-208ENST00000452047 Q8N814 137 aa8.3□□□□□ -1.08
CPSF4-208ENST00000452047 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-208ENST00000452047 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
CPSF4-208ENST00000452047 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
CPSF4-208ENST00000452047 SRRM2Q9UQ35 2752 aaKnown RBP8.29□□□□□ -1.08
CPSF4-208ENST00000452047 IGLV5-52A0A0A0MRZ9 124 aa8.29□□□□□ -1.08
CPSF4-208ENST00000452047 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
CPSF4-208ENST00000452047 SNAI2O43623 268 aa8.29□□□□□ -1.08
CPSF4-208ENST00000452047 CCL20P78556 96 aa8.29□□□□□ -1.08
CPSF4-208ENST00000452047 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
CPSF4-208ENST00000452047 C11orf52Q96A22 123 aa8.29□□□□□ -1.08
CPSF4-208ENST00000452047 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-208ENST00000452047 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 RPL35P42766 123 aaKnown RBP8.28□□□□□ -1.08
CPSF4-208ENST00000452047 UBE2D3P61077 147 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 UBE2D2P62837 147 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 WFDC2Q14508 124 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 NIT1Q86X76 327 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 DERL1Q9BUN8 251 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 TM2D2Q9BX73 214 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
CPSF4-208ENST00000452047 TRBV7-3A0A075B6L6 115 aa8.27□□□□□ -1.09
CPSF4-208ENST00000452047 OR5AL1P0C617 328 aa8.27□□□□□ -1.09
CPSF4-208ENST00000452047 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
CPSF4-208ENST00000452047 PRR27Q6MZM9 219 aa8.27□□□□□ -1.09
CPSF4-208ENST00000452047 OR10G8Q8NGN5 311 aa8.27□□□□□ -1.09
CPSF4-208ENST00000452047 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
CPSF4-208ENST00000452047 GNG13Q9P2W3 67 aa8.27□□□□□ -1.09
CPSF4-208ENST00000452047 RAB5CP51148 216 aa8.26□□□□□ -1.09
CPSF4-208ENST00000452047 RAB4BP61018 213 aa8.26□□□□□ -1.09
CPSF4-208ENST00000452047 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
CPSF4-208ENST00000452047 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
CPSF4-208ENST00000452047 MUC21A0A0G2JKD1 596 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 MUC21A0A140T8X8 626 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 SCO1O75880 301 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 IGLV2-8P01709 118 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 SULT1A2P50226 295 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 Q5VSD8 79 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 NEXN-AS1Q8NBZ9 246 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 DNAJC30Q96LL9 226 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
CPSF4-208ENST00000452047 URGCP-MRPS24S4R325 110 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms