RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 HLA-DQA1P01909 254 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 MED14OSP0DP75 135 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 GZMBP10144 247 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 CTRLP40313 264 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 HBBP68871 147 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 TDRG1Q3Y452 100 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 FAM159AQ6UWV7 190 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 TRAPPC1Q9Y5R8 145 aa15.17■□□□□ 0.02
C9orf3-208ENST00000451893 TMSB15BA0A087X1C1 80 aa15.16■□□□□ 0.02
C9orf3-208ENST00000451893 A0A1B0GXF2 115 aa15.16■□□□□ 0.02
C9orf3-208ENST00000451893 MRPL54Q6P161 138 aaKnown RBP15.16■□□□□ 0.02
C9orf3-208ENST00000451893 Q6ZR54 194 aa15.16■□□□□ 0.02
C9orf3-208ENST00000451893 ZNF575Q86XF7 245 aa15.16■□□□□ 0.02
C9orf3-208ENST00000451893 SSBP4Q9BWG4 385 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-208ENST00000451893 CNFNQ9BYD5 112 aa15.16■□□□□ 0.02
C9orf3-208ENST00000451893 TRGV2A0A075B6R0 118 aa15.15■□□□□ 0.02
C9orf3-208ENST00000451893 TRAV26-1A0A087WT03 109 aa15.15■□□□□ 0.02
C9orf3-208ENST00000451893 TRGC2P03986 189 aa15.15■□□□□ 0.02
C9orf3-208ENST00000451893 OR5AL1P0C617 328 aa15.15■□□□□ 0.02
C9orf3-208ENST00000451893 LYZL1Q6UWQ5 148 aa15.15■□□□□ 0.02
C9orf3-208ENST00000451893 TMA7Q9Y2S6 64 aaKnown RBP15.15■□□□□ 0.02
C9orf3-208ENST00000451893 A0A0J9YY99 117 aa15.14■□□□□ 0.01
C9orf3-208ENST00000451893 SPINK4O60575 86 aa15.14■□□□□ 0.01
C9orf3-208ENST00000451893 ANXA2RQ3ZCQ2 193 aa15.14■□□□□ 0.01
C9orf3-208ENST00000451893 SNAI2O43623 268 aa15.13■□□□□ 0.01
C9orf3-208ENST00000451893 ASIPP42127 132 aa15.13■□□□□ 0.01
C9orf3-208ENST00000451893 CACNG7P62955 275 aa15.13■□□□□ 0.01
C9orf3-208ENST00000451893 TMEM136Q6ZRR5 245 aa15.13■□□□□ 0.01
C9orf3-208ENST00000451893 GATD1Q8NB37 220 aa15.13■□□□□ 0.01
C9orf3-208ENST00000451893 LINC00467Q9BRT7 94 aa15.13■□□□□ 0.01
C9orf3-208ENST00000451893 IGHV1OR15-1A0A075B7D0 117 aa15.12■□□□□ 0.01
C9orf3-208ENST00000451893 A0A1B0GVY2 172 aa15.12■□□□□ 0.01
C9orf3-208ENST00000451893 GRIFINA4D1Z8 144 aa15.12■□□□□ 0.01
C9orf3-208ENST00000451893 NAGKQ9UJ70 344 aa15.12■□□□□ 0.01
C9orf3-208ENST00000451893 HECTD4Q9Y4D8 3996 aa15.12■□□□□ 0.01
C9orf3-208ENST00000451893 TRGV1A0A0A0MS02 117 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 NBDYA0A0U1RRE5 68 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 PHOX2AO14813 284 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 ARMS2P0C7Q2 107 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 S100A4P26447 101 aaKnown RBP15.11■□□□□ 0.01
C9orf3-208ENST00000451893 RAB4BP61018 213 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 FABP9Q0Z7S8 132 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 TPPP3Q9BW30 176 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 MRPL18Q9H0U6 180 aaKnown RBP15.11■□□□□ 0.01
C9orf3-208ENST00000451893 GSN-AS1Q9NRJ2 163 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 LINC00588Q9Y4M8 146 aa15.11■□□□□ 0.01
C9orf3-208ENST00000451893 DAZ2Q13117 558 aaKnown RBP15.1■□□□□ 0.01
C9orf3-208ENST00000451893 Q6ZTI0 123 aa15.1■□□□□ 0.01
C9orf3-208ENST00000451893 ZNRF2Q8NHG8 242 aa15.1■□□□□ 0.01
C9orf3-208ENST00000451893 FRZBQ92765 325 aa15.1■□□□□ 0.01
C9orf3-208ENST00000451893 TRGV11A0A075B6L2 103 aa15.09■□□□□ 0.01
C9orf3-208ENST00000451893 CAMPP49913 170 aa15.09■□□□□ 0.01
C9orf3-208ENST00000451893 MUC21Q5SSG8 566 aa15.09■□□□□ 0.01
C9orf3-208ENST00000451893 Q6ZQT7 251 aa15.09■□□□□ 0.01
C9orf3-208ENST00000451893 C6orf223Q8N319 242 aa15.09■□□□□ 0.01
C9orf3-208ENST00000451893 LINC00612Q8N6U2 182 aa15.09■□□□□ 0.01
C9orf3-208ENST00000451893 APCSP02743 223 aa15.08■□□□□ 0
C9orf3-208ENST00000451893 SCRT2Q9NQ03 307 aa15.08■□□□□ 0
C9orf3-208ENST00000451893 HOXA5P20719 270 aa15.07■□□□□ 0
C9orf3-208ENST00000451893 NTF3P20783 257 aa15.07■□□□□ 0
C9orf3-208ENST00000451893 TTC32Q5I0X7 151 aa15.07■□□□□ 0
C9orf3-208ENST00000451893 TP53TG3Q9ULZ0 132 aa15.07■□□□□ 0
C9orf3-208ENST00000451893 GNRH2O43555 120 aa15.06■□□□□ 0
C9orf3-208ENST00000451893 TRGC1P0CF51 173 aa15.06■□□□□ 0
C9orf3-208ENST00000451893 TWIST1Q15672 202 aa15.06■□□□□ 0
C9orf3-208ENST00000451893 SMIM15Q7Z3B0 74 aa15.06■□□□□ 0
C9orf3-208ENST00000451893 Q9H8V8 135 aa15.06■□□□□ 0
C9orf3-208ENST00000451893 HIST1H2BKO60814 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 S100A6P06703 90 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BJP06899 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BOP23527 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BBP33778 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BDP58876 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BCP62807 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST2H2BEQ16778 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.05■□□□□ -0
C9orf3-208ENST00000451893 SPANXN1Q5VSR9 72 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BHQ93079 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BNQ99877 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 HIST1H2BMQ99879 126 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 TMEM191AQ9H0A3 160 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 PHLDA3Q9Y5J5 127 aa15.05■□□□□ -0
C9orf3-208ENST00000451893 H3BNG1 76 aa15.04■□□□□ -0
C9orf3-208ENST00000451893 H3BVH4 76 aa15.04■□□□□ -0
C9orf3-208ENST00000451893 RNASE3P12724 160 aaKnown RBP15.04■□□□□ -0
C9orf3-208ENST00000451893 ZNF415Q09FC8 603 aa15.04■□□□□ -0
C9orf3-208ENST00000451893 IGHV3-16A0A0C4DH30 117 aa15.03■□□□□ -0
C9orf3-208ENST00000451893 ZFP82Q8N141 532 aa15.03■□□□□ -0
C9orf3-208ENST00000451893 C11orf72Q8NBR9 251 aa15.03■□□□□ -0
C9orf3-208ENST00000451893 IGHV3-53P01767 116 aa15.02■□□□□ -0
C9orf3-208ENST00000451893 DMRTA1Q5VZB9 504 aa15.02■□□□□ -0
C9orf3-208ENST00000451893 C9orf85Q96MD7 179 aa15.02■□□□□ -0
C9orf3-208ENST00000451893 MRPL16Q9NX20 251 aaKnown RBP15.02■□□□□ -0
C9orf3-208ENST00000451893 NXPH4O95158 308 aa15.01□□□□□ -0.01
C9orf3-208ENST00000451893 PIK3CD-AS1Q5SR53 167 aa15.01□□□□□ -0.01
C9orf3-208ENST00000451893 FAM104BQ5XKR9 115 aa15.01□□□□□ -0.01
C9orf3-208ENST00000451893 SYT8Q8NBV8 401 aa15.01□□□□□ -0.01
C9orf3-208ENST00000451893 OR10AG1Q8NH19 301 aa15.01□□□□□ -0.01
C9orf3-208ENST00000451893 PTH2Q96A98 100 aa15.01□□□□□ -0.01
C9orf3-208ENST00000451893 PAX4O43316 350 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms