RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 AP1S3Q96PC3 154 aa9.25□□□□□ -0.93
VPS33A-202ENST00000451053 HLA-DQA1P01909 254 aa9.24□□□□□ -0.93
VPS33A-202ENST00000451053 CAMPP49913 170 aa9.24□□□□□ -0.93
VPS33A-202ENST00000451053 RAB4BP61018 213 aa9.24□□□□□ -0.93
VPS33A-202ENST00000451053 LGALS9BQ3B8N2 356 aa9.24□□□□□ -0.93
VPS33A-202ENST00000451053 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
VPS33A-202ENST00000451053 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.24□□□□□ -0.93
VPS33A-202ENST00000451053 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
VPS33A-202ENST00000451053 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
VPS33A-202ENST00000451053 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
VPS33A-202ENST00000451053 SSTP61278 116 aa9.23□□□□□ -0.93
VPS33A-202ENST00000451053 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
VPS33A-202ENST00000451053 PHLDA1Q8WV24 401 aaPredicted RBP9.23□□□□□ -0.93
VPS33A-202ENST00000451053 A8MWV9 139 aa9.22□□□□□ -0.93
VPS33A-202ENST00000451053 SMIM17P0DL12 118 aa9.22□□□□□ -0.93
VPS33A-202ENST00000451053 HTN3P15516 51 aa9.22□□□□□ -0.93
VPS33A-202ENST00000451053 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
VPS33A-202ENST00000451053 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
VPS33A-202ENST00000451053 RASL10AQ92737 203 aa9.22□□□□□ -0.93
VPS33A-202ENST00000451053 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
VPS33A-202ENST00000451053 TRGV2A0A075B6R0 118 aa9.21□□□□□ -0.94
VPS33A-202ENST00000451053 TRAV10A0A0B4J240 114 aa9.21□□□□□ -0.94
VPS33A-202ENST00000451053 TMEM136Q6ZRR5 245 aa9.21□□□□□ -0.94
VPS33A-202ENST00000451053 DPH3P1Q9H4G8 78 aa9.21□□□□□ -0.94
VPS33A-202ENST00000451053 MSRB1Q9NZV6 116 aa9.21□□□□□ -0.94
VPS33A-202ENST00000451053 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
VPS33A-202ENST00000451053 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
VPS33A-202ENST00000451053 C3orf84H3BNL1 204 aa9.2□□□□□ -0.94
VPS33A-202ENST00000451053 CEMP1Q6PRD7 247 aaPredicted RBP9.2□□□□□ -0.94
VPS33A-202ENST00000451053 FRZBQ92765 325 aa9.2□□□□□ -0.94
VPS33A-202ENST00000451053 DNAH7Q8WXX0 4024 aa9.2□□□□□ -0.94
VPS33A-202ENST00000451053 NUPR2A6NF83 97 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 RHODO00212 210 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 IGHV3-53P01767 116 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 APCSP02743 223 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 ATP5G1P05496 136 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 CASC10Q5T4H9 136 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 C18orf15Q96N68 181 aa9.19□□□□□ -0.94
VPS33A-202ENST00000451053 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
VPS33A-202ENST00000451053 F5H768 121 aa9.18□□□□□ -0.94
VPS33A-202ENST00000451053 CIDEAO60543 219 aa9.18□□□□□ -0.94
VPS33A-202ENST00000451053 HOXA5P20719 270 aa9.18□□□□□ -0.94
VPS33A-202ENST00000451053 EVI2AP22794 236 aa9.18□□□□□ -0.94
VPS33A-202ENST00000451053 FABP9Q0Z7S8 132 aa9.18□□□□□ -0.94
VPS33A-202ENST00000451053 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
VPS33A-202ENST00000451053 POM121L12Q8N7R1 296 aa9.18□□□□□ -0.94
VPS33A-202ENST00000451053 TRAV4A0A0B4J268 109 aa9.17□□□□□ -0.94
VPS33A-202ENST00000451053 RS1O15537 224 aa9.17□□□□□ -0.94
VPS33A-202ENST00000451053 OR4C5Q8NGB2 326 aa9.17□□□□□ -0.94
VPS33A-202ENST00000451053 ZNF479Q96JC4 524 aa9.17□□□□□ -0.94
VPS33A-202ENST00000451053 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 PPBPP02775 128 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 TRGC2P03986 189 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 MGPP08493 103 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 SLAQ13239 276 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 FAM74A4Q5TZK3 123 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 MRAP2Q96G30 205 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 JPT2Q9H910 190 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
VPS33A-202ENST00000451053 A0A087WWL8 130 aa9.15□□□□□ -0.94
VPS33A-202ENST00000451053 IGLL5B9A064 214 aa9.15□□□□□ -0.94
VPS33A-202ENST00000451053 CRYGDP07320 174 aa9.15□□□□□ -0.94
VPS33A-202ENST00000451053 RAB4AP20338 218 aa9.15□□□□□ -0.94
VPS33A-202ENST00000451053 FHL2Q14192 279 aa9.15□□□□□ -0.94
VPS33A-202ENST00000451053 ZNF56Q15929 161 aa9.15□□□□□ -0.94
VPS33A-202ENST00000451053 KLK5Q9Y337 293 aaPredicted RBP9.15□□□□□ -0.94
VPS33A-202ENST00000451053 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 F5H697 171 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 H7C1H1 209 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 PPP1R17O96001 155 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 CKS2P33552 79 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
VPS33A-202ENST00000451053 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 RNF185Q96GF1 192 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 SAMD10Q9BYL1 202 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
VPS33A-202ENST00000451053 IGHV3-73A0A0B4J1V6 119 aa9.13□□□□□ -0.95
VPS33A-202ENST00000451053 LINC00315P59091 139 aa9.13□□□□□ -0.95
VPS33A-202ENST00000451053 RAB5BP61020 215 aa9.13□□□□□ -0.95
VPS33A-202ENST00000451053 TRAV26-1A0A087WT03 109 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 TRGV4A0A0C4DH28 118 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 A0A0J9YY99 117 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 D6R8Y8 96 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 KIAA1644Q3SXP7 199 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 UFSP1Q6NVU6 142 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
VPS33A-202ENST00000451053 PHOX2AO14813 284 aa9.11□□□□□ -0.95
VPS33A-202ENST00000451053 SRIP30626 198 aa9.11□□□□□ -0.95
VPS33A-202ENST00000451053 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
VPS33A-202ENST00000451053 VSIG2Q96IQ7 327 aa9.11□□□□□ -0.95
VPS33A-202ENST00000451053 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
VPS33A-202ENST00000451053 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
VPS33A-202ENST00000451053 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
VPS33A-202ENST00000451053 GATA1P15976 413 aaPredicted RBP9.1□□□□□ -0.95
VPS33A-202ENST00000451053 CRYBA4P53673 196 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms