RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 OTOGLQ3ZCN5 2332 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 TRAV41A0A0B4J266 112 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 hADV29S1A0JD25 119 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 M0R1B8 84 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 M0R381 172 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 LEPROTO15243 131 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 TRACP01848 142 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 CXCL5P42830 114 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 ZNF876PQ49A33 203 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 RNF182Q8N6D2 247 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 KIR2DL5BQ8NHK3 375 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 MRAPQ8TCY5 172 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 EEF1AKMT3Q96AZ1 226 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 DPH3Q96FX2 82 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 A0A087WWL8 130 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 MGPP08493 103 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 TMEM258P61165 79 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 AGPAT4-IT1Q9H0P7 198 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 SLC25A15Q9Y619 301 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 DCHS1Q96JQ0 3298 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 IGHV1-3A0A0C4DH29 117 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 A0A1W2PNU3 283 aaPredicted RBP6.5□□□□□ -1.37
LSM5-208ENST00000450169 SPRY2O43597 315 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 PPP1R17O96001 155 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
LSM5-208ENST00000450169 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 ATOX1O00244 68 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 IGHV1-8P0DP01 117 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 RPL39P62891 51 aaKnown RBP6.49□□□□□ -1.37
LSM5-208ENST00000450169 HRCT1Q6UXD1 115 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 CYSTM1Q9H1C7 97 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 CNOT1A5YKK6 2376 aaKnown RBP6.49□□□□□ -1.37
LSM5-208ENST00000450169 MED13Q9UHV7 2174 aa6.49□□□□□ -1.37
LSM5-208ENST00000450169 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 A0A0J9YX75 114 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 NDUFB3O43676 98 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 C19orf54Q5BKX5 351 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 ZNF292O60281 2723 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 HIST1H4AP62805 103 aaKnown RBP6.48□□□□□ -1.37
LSM5-208ENST00000450169 CCL8P80075 99 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 SDIM1Q6ZPB5 146 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 PRSS33Q8NF86 280 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 CADP27708 2225 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 BOD1L1Q8NFC6 3051 aa6.48□□□□□ -1.37
LSM5-208ENST00000450169 URB1O60287 2271 aaKnown RBP6.47□□□□□ -1.37
LSM5-208ENST00000450169 IGHV3OR16-8A0A075B7F1 116 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 OXTP01178 125 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 PRSS2P07478 247 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 Q5XG85 94 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 GPHB5Q86YW7 130 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 MBD3L4A6NDZ8 208 aaPredicted RBP6.47□□□□□ -1.37
LSM5-208ENST00000450169 MBD3L3A6NE82 208 aaPredicted RBP6.47□□□□□ -1.37
LSM5-208ENST00000450169 I3L3M4 83 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 IGHV3-23P01764 117 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 LOXP28300 417 aaPredicted RBP6.47□□□□□ -1.37
LSM5-208ENST00000450169 DUX5Q96PT3 197 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 DSCR8Q96T75 97 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 DSPP15924 2871 aaKnown RBP6.47□□□□□ -1.37
LSM5-208ENST00000450169 MALRD1Q5VYJ5 2156 aa6.47□□□□□ -1.37
LSM5-208ENST00000450169 IGLV11-55A0A075B6I3 123 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 S100A4P26447 101 aaKnown RBP6.46□□□□□ -1.37
LSM5-208ENST00000450169 UCNP55089 124 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 LYPD2Q6UXB3 125 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 Q6ZSV7 163 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 LITAFQ99732 161 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 PEMTQ9UBM1 199 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 PHLDA3Q9Y5J5 127 aa6.46□□□□□ -1.37
LSM5-208ENST00000450169 TRBV7-1A0A0A6YYK4 115 aa6.46□□□□□ -1.38
LSM5-208ENST00000450169 BUB1B-PAK6H3BSN5 160 aa6.46□□□□□ -1.38
LSM5-208ENST00000450169 IGLV1-47P01700 117 aa6.46□□□□□ -1.38
LSM5-208ENST00000450169 PRB3Q04118 309 aaPredicted RBP6.46□□□□□ -1.38
LSM5-208ENST00000450169 RHOHQ15669 191 aa6.46□□□□□ -1.38
LSM5-208ENST00000450169 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
LSM5-208ENST00000450169 RIF1Q5UIP0 2472 aaKnown RBP6.46□□□□□ -1.38
LSM5-208ENST00000450169 ICE1Q9Y2F5 2266 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 CTSGP08311 255 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
LSM5-208ENST00000450169 RNF5Q99942 180 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 ZZEF1O43149 2961 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 IGHV3-35A0A0C4DH35 117 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 PRR9Q5T870 116 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 C9orf47Q6ZRZ4 202 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 ASCL5Q7RTU5 278 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 FAM19A4Q96LR4 140 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 ZNF580Q9UK33 172 aa6.45□□□□□ -1.38
LSM5-208ENST00000450169 VCYO14598 125 aa6.44□□□□□ -1.38
LSM5-208ENST00000450169 POLR2KP53803 58 aaKnown RBP6.44□□□□□ -1.38
LSM5-208ENST00000450169 RPL18AQ02543 176 aaKnown RBP6.44□□□□□ -1.38
LSM5-208ENST00000450169 TMEM61Q8N0U2 210 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms