RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZNF253O75346 499 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 HOXA5P20719 270 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 UTF1Q5T230 341 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 LYPD1Q8N2G4 141 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 PRRC2CQ9Y520 2896 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 A0A1B0GVG6 124 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 ID3Q02535 119 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 C1orf158Q8N1D5 194 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 CAMK2N2Q96S95 79 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 A6NED7 52 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 A8MWV9 139 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 FHL3Q13643 280 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 WFDC9Q8NEX5 89 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGHV4-28A0A0C4DH34 117 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 MLANAQ16655 118 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 FMC1Q96HJ9 113 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 MKI67P46013 3256 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGLC1P0CG04 106 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 PSMB8P28062 276 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 FER1L6-AS1Q8NA97 138 aa4.29□□□□□ -1.72
CDC42BPA-209ENST00000448940 C5orf42Q9H799 3197 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 C1orf147Q96MC9 270 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 SPATA45Q537H7 98 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 Q6ZSR3 168 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGKV2D-26A0A0A0MRZ7 120 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 A4D1N5 150 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 M0R2P5 195 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 CRYGCP07315 174 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 C18orf65Q6ZTR6 163 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 MAP6D1Q9H9H5 199 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 V9GYH0 126 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 NXPH4O95158 308 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 ESDP10768 282 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 PAX2Q02962 417 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 LAIR2Q6ISS4 152 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 PRO0255Q9UI72 69 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 TEX15Q9BXT5 2789 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 LINC00862A6NCI5 91 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 NDUFB4O95168 129 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 SPINK8P0C7L1 97 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 XCL1P47992 114 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 TAL2Q16559 108 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 TMEM170BQ5T4T1 132 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 EXOC3-AS1Q8N2X6 119 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 LINC00574Q9H8X3 128 aa4.28□□□□□ -1.72
CDC42BPA-209ENST00000448940 FNDC10F2Z333 226 aa4.28□□□□□ -1.73
CDC42BPA-209ENST00000448940 TRBV20-1A0A075B6N2 111 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 LHFPL1Q86WI0 220 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 ST6GAL2Q96JF0 529 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 MLST8Q9BVC4 326 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 EPDR1Q9UM22 224 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 RNF222A6NCQ9 220 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 APOHP02749 345 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 PRR20EP86478 221 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 PRR20CP86479 221 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 PRR20DP86480 221 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 PRR20BP86481 221 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 PRR20AP86496 221 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 C6orf223Q8N319 242 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 TRBV12-3P01733 135 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 HBBP68871 147 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q8TAT8 98 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 GFI1Q99684 422 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 FAM231BA6NCW3 169 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 RITA1Q96K30 269 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 IGHV1-24A0A0C4DH33 117 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 A0A0U1RRA0 63 aa4.27□□□□□ -1.73
CDC42BPA-209ENST00000448940 TMEM250H0YL14 139 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 HERV-K104P63124 156 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q6AWC8 147 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 LINC00336Q6ZUF6 198 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 K7EIM0 57 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 C1QBP02746 253 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 REG3GQ6UW15 175 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 SPATA12Q7Z6I5 190 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q8N976 141 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 MRGPRG-AS1Q2M3A8 158 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 TDRG1Q3Y452 100 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q9H8V8 135 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 BCL2P10415 239 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 POM121L12Q8N7R1 296 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 GATD1Q8NB37 220 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 Q6ZS46 218 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 PPDPFLQ8WWR9 84 aa4.26□□□□□ -1.73
CDC42BPA-209ENST00000448940 FAM240AA0A1B0GVK7 77 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 LY6LH3BQJ8 138 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 C16orf54Q6UWD8 224 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 UNQ9165/PRO28630Q6UXU0 137 aa4.25□□□□□ -1.73
CDC42BPA-209ENST00000448940 SMIM2Q9BVW6 85 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms