RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TMEM238LA0A1B0GVL6 79 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 A0A1W2PPM0 123 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 KNCNA6PVL3 124 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 GATA3P23771 443 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 GTSCR1Q86UQ5 136 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 Q6YL49 198 aa11.04□□□□□ -0.64
SF1-211ENST00000448404 KRTAP1-3Q8IUG1 177 aa11.04□□□□□ -0.64
SF1-211ENST00000448404 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
SF1-211ENST00000448404 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
SF1-211ENST00000448404 A0A1W2PRX2 142 aa11.04□□□□□ -0.64
SF1-211ENST00000448404 FCER1GP30273 86 aa11.04□□□□□ -0.64
SF1-211ENST00000448404 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
SF1-211ENST00000448404 ODF1Q14990 250 aa11.03□□□□□ -0.64
SF1-211ENST00000448404 Q8N8P6 123 aa11.03□□□□□ -0.64
SF1-211ENST00000448404 ATP6V0BQ99437 205 aa11.03□□□□□ -0.64
SF1-211ENST00000448404 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.64
SF1-211ENST00000448404 DPF1Q92782 380 aa11.02□□□□□ -0.64
SF1-211ENST00000448404 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.64
SF1-211ENST00000448404 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.64
SF1-211ENST00000448404 FN1P02751 2386 aaKnown RBP11.02□□□□□ -0.65
SF1-211ENST00000448404 FABP2P12104 132 aa11.02□□□□□ -0.65
SF1-211ENST00000448404 EMP1P54849 157 aa11.02□□□□□ -0.65
SF1-211ENST00000448404 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.65
SF1-211ENST00000448404 LGALS9CQ6DKI2 356 aa11.02□□□□□ -0.65
SF1-211ENST00000448404 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.65
SF1-211ENST00000448404 SIGMAR1Q99720 223 aa11.02□□□□□ -0.65
SF1-211ENST00000448404 F5H697 171 aa11.01□□□□□ -0.65
SF1-211ENST00000448404 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
SF1-211ENST00000448404 HSD52Q0P140 79 aa11.01□□□□□ -0.65
SF1-211ENST00000448404 SAMD5Q5TGI4 173 aa11.01□□□□□ -0.65
SF1-211ENST00000448404 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
SF1-211ENST00000448404 ANK3Q12955 4377 aaKnown RBP11.01□□□□□ -0.65
SF1-211ENST00000448404 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
SF1-211ENST00000448404 FSHBP01225 129 aa11□□□□□ -0.65
SF1-211ENST00000448404 LGALS1P09382 135 aaKnown RBP11□□□□□ -0.65
SF1-211ENST00000448404 LAGE3Q14657 143 aa11□□□□□ -0.65
SF1-211ENST00000448404 KLLNB2CW77 178 aa11□□□□□ -0.65
SF1-211ENST00000448404 BRI3O95415 125 aa11□□□□□ -0.65
SF1-211ENST00000448404 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
SF1-211ENST00000448404 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
SF1-211ENST00000448404 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
SF1-211ENST00000448404 OR11H1Q8NG94 326 aa11□□□□□ -0.65
SF1-211ENST00000448404 SMIM2Q9BVW6 85 aa11□□□□□ -0.65
SF1-211ENST00000448404 TSSC4Q9Y5U2 329 aaPredicted RBP11□□□□□ -0.65
SF1-211ENST00000448404 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
SF1-211ENST00000448404 Q8N1Y9 231 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 IGHV4-4A0A075B6R2 117 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 K7ERJ3 54 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 GCSHP23434 173 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 ID1P41134 155 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 A0A0J9YX75 114 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 K7EMT4 169 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 K7EQG2 157 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 DPH3P1Q9H4G8 78 aa10.99□□□□□ -0.65
SF1-211ENST00000448404 HIVEP2P31629 2446 aa10.98□□□□□ -0.65
SF1-211ENST00000448404 J3QLI3 93 aa10.98□□□□□ -0.65
SF1-211ENST00000448404 DEFB131AP59861 70 aa10.98□□□□□ -0.65
SF1-211ENST00000448404 APRG1Q8IVJ8 170 aa10.98□□□□□ -0.65
SF1-211ENST00000448404 LINC00315P59091 139 aa10.98□□□□□ -0.65
SF1-211ENST00000448404 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
SF1-211ENST00000448404 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 SMIM13P0DJ93 91 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 Q9UF83 564 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 A0A1B0GV72 72 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 TMEM61Q8N0U2 210 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 DLX4Q92988 240 aaPredicted RBP10.97□□□□□ -0.65
SF1-211ENST00000448404 OTOGQ6ZRI0 2925 aa10.97□□□□□ -0.65
SF1-211ENST00000448404 FXYD2P54710 66 aa10.96□□□□□ -0.65
SF1-211ENST00000448404 PROK1P58294 105 aa10.96□□□□□ -0.65
SF1-211ENST00000448404 SNRPD3P62318 126 aaKnown RBP10.96□□□□□ -0.65
SF1-211ENST00000448404 WFDC2Q14508 124 aa10.96□□□□□ -0.65
SF1-211ENST00000448404 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
SF1-211ENST00000448404 SUMO4Q6EEV6 95 aa10.96□□□□□ -0.66
SF1-211ENST00000448404 MAPKAPK5-AS1Q8N8E1 139 aa10.96□□□□□ -0.66
SF1-211ENST00000448404 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.66
SF1-211ENST00000448404 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
SF1-211ENST00000448404 IGKCP01834 107 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 CD300EQ496F6 205 aaPredicted RBP10.95□□□□□ -0.66
SF1-211ENST00000448404 MTURNQ8N3F0 131 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 KLHL30-AS1Q8NEE0 82 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 ESM1Q9NQ30 184 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 KIF25-AS1Q9Y6Z4 181 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 NBEAL2Q6ZNJ1 2754 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 VWFP04275 2813 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.95□□□□□ -0.66
SF1-211ENST00000448404 P0DMU3 169 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 FAM231AP0DMU4 169 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 FAM231CP0DMU5 169 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 ZNF580Q9UK33 172 aa10.95□□□□□ -0.66
SF1-211ENST00000448404 RBMY1BA6NDE4 496 aaKnown RBP10.94□□□□□ -0.66
SF1-211ENST00000448404 RBMY1EA6NEQ0 496 aaKnown RBP10.94□□□□□ -0.66
SF1-211ENST00000448404 RBMY1DP0C7P1 496 aaKnown RBP10.94□□□□□ -0.66
SF1-211ENST00000448404 SH2D6Q7Z4S9 175 aa10.94□□□□□ -0.66
SF1-211ENST00000448404 SCGB3A1Q96QR1 104 aa10.94□□□□□ -0.66
SF1-211ENST00000448404 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
SF1-211ENST00000448404 LINC01546A6NGU7 62 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms