RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 APLNQ9ULZ1 77 aa9.98□□□□□ -0.81
SREBF1-207ENST00000447641 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
SREBF1-207ENST00000447641 SPINK4O60575 86 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 DNLZQ5SXM8 178 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 FRZBQ92765 325 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 C18orf15Q96N68 181 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
SREBF1-207ENST00000447641 TMSB15BA0A087X1C1 80 aa9.96□□□□□ -0.82
SREBF1-207ENST00000447641 IGLL5B9A064 214 aa9.96□□□□□ -0.82
SREBF1-207ENST00000447641 GNRH2O43555 120 aa9.96□□□□□ -0.82
SREBF1-207ENST00000447641 S100A6P06703 90 aa9.96□□□□□ -0.82
SREBF1-207ENST00000447641 LGALS9BQ3B8N2 356 aa9.96□□□□□ -0.82
SREBF1-207ENST00000447641 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
SREBF1-207ENST00000447641 GTSF1Q8WW33 167 aa9.96□□□□□ -0.82
SREBF1-207ENST00000447641 IGHV4-4A0A075B6R2 117 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 IGLC6P0CF74 106 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 Q6ZTI0 123 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 SYT8Q8NBV8 401 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 TMA7Q9Y2S6 64 aaKnown RBP9.95□□□□□ -0.82
SREBF1-207ENST00000447641 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
SREBF1-207ENST00000447641 IGKV3D-20A0A0C4DH25 116 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 A0A1B0GXF2 115 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 GAGE12BA1L429 117 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 GAGE7O76087 117 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 LY6G6CO95867 125 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 APCSP02743 223 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 ATP5G1P05496 136 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 GAGE12FP0CL80 117 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 GAGE12GP0CL81 117 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 GAGE12IP0CL82 117 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 GZMBP10144 247 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 ZNF415Q09FC8 603 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 ZNF575Q86XF7 245 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 SPXQ9BT56 116 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 MUC4Q99102 2169 aa9.94□□□□□ -0.82
SREBF1-207ENST00000447641 SNAI2O43623 268 aa9.93□□□□□ -0.82
SREBF1-207ENST00000447641 TRGC2P03986 189 aa9.93□□□□□ -0.82
SREBF1-207ENST00000447641 CAMPP49913 170 aa9.93□□□□□ -0.82
SREBF1-207ENST00000447641 TWIST1Q15672 202 aa9.93□□□□□ -0.82
SREBF1-207ENST00000447641 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
SREBF1-207ENST00000447641 RASL10AQ92737 203 aa9.93□□□□□ -0.82
SREBF1-207ENST00000447641 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
SREBF1-207ENST00000447641 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
SREBF1-207ENST00000447641 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
SREBF1-207ENST00000447641 GRIFINA4D1Z8 144 aa9.92□□□□□ -0.82
SREBF1-207ENST00000447641 HTN3P15516 51 aa9.92□□□□□ -0.82
SREBF1-207ENST00000447641 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
SREBF1-207ENST00000447641 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
SREBF1-207ENST00000447641 NDUFAF3Q9BU61 184 aa9.92□□□□□ -0.82
SREBF1-207ENST00000447641 ARMS2P0C7Q2 107 aa9.91□□□□□ -0.82
SREBF1-207ENST00000447641 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
SREBF1-207ENST00000447641 PKD1P98161 4303 aa9.91□□□□□ -0.82
SREBF1-207ENST00000447641 F5H768 121 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 H3BVH4 76 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 M0R2P5 195 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 PPBPP02775 128 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 HOXA5P20719 270 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 NTF3P20783 257 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 PTH2Q96A98 100 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 C9orf85Q96MD7 179 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 AP1S3Q96PC3 154 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 TMEM191AQ9H0A3 160 aa9.9□□□□□ -0.82
SREBF1-207ENST00000447641 MRPL16Q9NX20 251 aaKnown RBP9.9□□□□□ -0.82
SREBF1-207ENST00000447641 TRGV2A0A075B6R0 118 aa9.89□□□□□ -0.83
SREBF1-207ENST00000447641 RNASE3P12724 160 aaKnown RBP9.89□□□□□ -0.83
SREBF1-207ENST00000447641 SCRT2Q9NQ03 307 aa9.89□□□□□ -0.83
SREBF1-207ENST00000447641 NACAE9PAV3 2078 aa9.88□□□□□ -0.83
SREBF1-207ENST00000447641 H3BNG1 76 aa9.88□□□□□ -0.83
SREBF1-207ENST00000447641 PPP1R17O96001 155 aa9.88□□□□□ -0.83
SREBF1-207ENST00000447641 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
SREBF1-207ENST00000447641 LAMTOR2Q9Y2Q5 125 aa9.88□□□□□ -0.83
SREBF1-207ENST00000447641 NXPH4O95158 308 aa9.87□□□□□ -0.83
SREBF1-207ENST00000447641 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
SREBF1-207ENST00000447641 C15orf53Q8NAA6 179 aa9.87□□□□□ -0.83
SREBF1-207ENST00000447641 M0R381 172 aa9.86□□□□□ -0.83
SREBF1-207ENST00000447641 FHL2Q14192 279 aa9.86□□□□□ -0.83
SREBF1-207ENST00000447641 OR10J3Q5JRS4 329 aa9.86□□□□□ -0.83
SREBF1-207ENST00000447641 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
SREBF1-207ENST00000447641 TRAV26-1A0A087WT03 109 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST1H2BCP62807 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST2H2BEQ16778 126 aa9.85□□□□□ -0.83
SREBF1-207ENST00000447641 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.85□□□□□ -0.83
SREBF1-207ENST00000447641 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms