RNA–Protein interactions for RNA: ENST00000446625.6

LIMCH1-204, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 5

Gene LIMCH1, Length 789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-204ENST00000446625 A0A0U1RQV1 116 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 SSNA1O43805 119 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 PFDN1O60925 122 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 SLPIP03973 132 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 PVALBP20472 110 aaPredicted RBP4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 CNBPP62633 177 aaKnown RBP4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 NHLH2Q02577 135 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 MIAQ16674 131 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 MPV17L2Q567V2 206 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 SPINK6Q6UWN8 80 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 OR10G7Q8NGN6 311 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 OR2G3Q8NGZ4 309 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 GTSF1Q8WW33 167 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
LIMCH1-204ENST00000446625 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 hDV102S1A0JD36 115 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 TAAR5O14804 337 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 GHRHP01286 108 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 ANGP03950 147 aaKnown RBP4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 H2BFSP57053 126 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 HBG1P69891 147 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 HBG2P69892 147 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 ATP6V1FQ16864 119 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 TCTE3Q8IZS6 198 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 CLRN3Q8NCR9 226 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 OR5C1Q8NGR4 320 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 CMTM2Q8TAZ6 248 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 SMIM3Q9BZL3 60 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 OR5AC2Q9NZP5 309 aa4.84□□□□□ -1.63
LIMCH1-204ENST00000446625 A0A087WWL8 130 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 G3V3Q6 166 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 GCGP01275 180 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 GIPP09681 153 aaPredicted RBP4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 UBE2D3P61077 147 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 UBE2D2P62837 147 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 GNG5P63218 68 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 SRSF9Q13242 221 aaKnown RBP eCLIP4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 CLPSL2Q6UWE3 100 aa4.83□□□□□ -1.64
LIMCH1-204ENST00000446625 TRBV6-8A0A0A6YYG3 113 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 MUC21A0A0G2JKD1 596 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 HMGB3O15347 200 aaKnown RBP4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 IL15RAQ13261 267 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 LYPD6BQ8NI32 183 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 NDFIP1Q9BT67 221 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 PRR34Q9NV39 138 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 MBD2Q9UBB5 411 aa4.82□□□□□ -1.64
LIMCH1-204ENST00000446625 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 IGKV3D-20A0A0C4DH25 116 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 H0YIZ8 118 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 SMLR1H3BR10 107 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 RHODO00212 210 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 S100A4P26447 101 aaKnown RBP4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 RPL36AP83881 106 aaKnown RBP4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 COX6A2Q02221 97 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 KHDC3LQ587J8 217 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 Q5BKY6 102 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 FAM74A1Q5RGS3 127 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 LINC00269Q8N2A0 174 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 ARL6IP6Q8N6S5 226 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 CHCHD5Q9BSY4 110 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 WDR61Q9GZS3 305 aaKnown RBP4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
LIMCH1-204ENST00000446625 IGLV10-54A0A075B6I4 117 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 IGKV2-24A0A0C4DH68 120 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 H7C1H1 209 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 RBX1P62877 108 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 STPG4Q8N801 248 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 OR11H4Q8NGC9 324 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 KCNIP2Q9NS61 270 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 VAX2Q9UIW0 290 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
LIMCH1-204ENST00000446625 C17orf112F2Z3M2 114 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 H3BVH4 76 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 MPC2O95563 127 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 NKX2-5P52952 324 aaPredicted RBP4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 TAS2R45P59539 299 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 RAB2AP61019 212 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 CYCSP99999 105 aaKnown RBP4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 ZFP69Q49AA0 526 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 SMUG1Q53HV7 270 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 OR10G8Q8NGN5 311 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 PPP1R1CQ8WVI7 109 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 SFRP2Q96HF1 295 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 IL36BQ9NZH7 164 aa4.79□□□□□ -1.64
LIMCH1-204ENST00000446625 FAM231BA6NCW3 169 aa4.78□□□□□ -1.64
LIMCH1-204ENST00000446625 TCRAP04437 139 aa4.78□□□□□ -1.64
LIMCH1-204ENST00000446625 ARMS2P0C7Q2 107 aa4.78□□□□□ -1.64
LIMCH1-204ENST00000446625 PKIAP61925 76 aa4.78□□□□□ -1.64
LIMCH1-204ENST00000446625 GAGE6Q13070 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms