RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PIP4P1Q86T03 277 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 NPFFO15130 113 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 NPBQ8NG41 125 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 PTPRSQ13332 1948 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 TRIAP1O43715 76 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 EEF1AKMT3Q96AZ1 226 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 OVOL3O00110 214 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 FAM27E3Q08E93 113 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 MDFICQ9P1T7 246 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 UCNP55089 124 aa3.85□□□□□ -1.79
HERC1-201ENST00000443617 TRBV30A0A0K0K1B3 111 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 UQCRQO14949 82 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 C11orf21Q9P2W6 132 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 EPG5Q9HCE0 2579 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 H3BT86 120 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 INAFM2P0DMQ5 153 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 FAM74A4Q5TZK3 123 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 LY6G5BQ8NDX9 201 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 TRAV41A0A0B4J266 112 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 CD28P10747 220 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 IMUPQ9GZP8 106 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 OOSP1A8MZH6 123 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 CITED2Q99967 270 aaPredicted RBP3.84□□□□□ -1.79
HERC1-201ENST00000443617 CTSZQ9UBR2 303 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 LRP4O75096 1905 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
HERC1-201ENST00000443617 GNRH2O43555 120 aa3.84□□□□□ -1.8
HERC1-201ENST00000443617 ZNF876PQ49A33 203 aa3.84□□□□□ -1.8
HERC1-201ENST00000443617 CRIP2P52943 208 aaPredicted RBP3.84□□□□□ -1.8
HERC1-201ENST00000443617 MRGPRG-AS1Q2M3A8 158 aa3.84□□□□□ -1.8
HERC1-201ENST00000443617 Q6ZS46 218 aa3.84□□□□□ -1.8
HERC1-201ENST00000443617 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.8
HERC1-201ENST00000443617 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 SMAD5-AS1Q9Y6J3 95 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 IGLV11-55A0A075B6I3 123 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 TIMM17AQ99595 171 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 ELANEP08246 267 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 LINC00527Q9UJ94 153 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 IGF1P05019 195 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 COX6B1P14854 86 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 SMIM9A6NGZ8 99 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 A0A1B0GX51 115 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
HERC1-201ENST00000443617 IGIPA6NJ69 53 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 B9A039 149 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 FASNP49327 2511 aaKnown RBP3.83□□□□□ -1.8
HERC1-201ENST00000443617 C9orf47Q6ZRZ4 202 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 NPC2P61916 151 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 KAAG1Q9UBP8 84 aa3.83□□□□□ -1.8
HERC1-201ENST00000443617 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 LY6DQ14210 128 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 NBEAQ8NFP9 2946 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
HERC1-201ENST00000443617 DAND5Q8N907 189 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 I3L3M4 83 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 TRBV7-1A0A0A6YYK4 115 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 TRBV7-7A0A0K0K1E9 115 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 TSPEAR-AS2P59090 65 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 ZNRF2Q8NHG8 242 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
HERC1-201ENST00000443617 BUB3O43684 328 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 DGAT2L7PQ6IED9 249 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 hADV29S1A0JD25 119 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 NDPQ00604 133 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 IGFBPL1Q8WX77 278 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 RNASE6Q93091 150 aaKnown RBP3.82□□□□□ -1.8
HERC1-201ENST00000443617 ATOX1O00244 68 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 ZNF883P0CG24 379 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 FANCD2OSQ96PS1 177 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 OVOL2Q9BRP0 275 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 COL4A2P08572 1712 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 LYNX1G3V0Z9 82 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 LYNX1P0DP58 116 aa3.82□□□□□ -1.8
HERC1-201ENST00000443617 FDCSPQ8NFU4 85 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 VMO1Q7Z5L0 202 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 SPRY4Q9C004 299 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 ARRDC1-AS1Q9H2J1 176 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 GPHB5Q86YW7 130 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 IGHV1-69DA0A0B4J2H0 117 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 BRI3O95415 125 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 TSHBP01222 138 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 HTN1P15515 57 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 ZNF22P17026 224 aaPredicted RBP3.81□□□□□ -1.8
HERC1-201ENST00000443617 UBE2E1P51965 193 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 LOC107984640A0A0U1RRK4 108 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 C20orf173Q96LM9 149 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
HERC1-201ENST00000443617 LENEPQ9Y5L5 61 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 IGHV3-30-3P0DP02 117 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 SUMO4Q6EEV6 95 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 LY6LH3BQJ8 138 aa3.81□□□□□ -1.8
HERC1-201ENST00000443617 TNFRSF13BO14836 293 aaPredicted RBP3.8□□□□□ -1.8
HERC1-201ENST00000443617 CENPEQ02224 2701 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 A0A0J9YXV3 536 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 PSMG3-AS1Q96PY0 264 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 IGKV3D-7A0A0C4DH55 119 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms