RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SLAQ13239 276 aa8.8□□□□□ -1
PDLIM2-212ENST00000443561 GTSF1Q8WW33 167 aa8.8□□□□□ -1
PDLIM2-212ENST00000443561 LY96Q9Y6Y9 160 aa8.8□□□□□ -1
PDLIM2-212ENST00000443561 RTL8CO15255 209 aa8.79□□□□□ -1
PDLIM2-212ENST00000443561 CTRLP40313 264 aa8.79□□□□□ -1
PDLIM2-212ENST00000443561 LYPD5Q6UWN5 251 aa8.79□□□□□ -1
PDLIM2-212ENST00000443561 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
PDLIM2-212ENST00000443561 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
PDLIM2-212ENST00000443561 RPP21Q9H633 154 aaKnown RBP8.79□□□□□ -1
PDLIM2-212ENST00000443561 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
PDLIM2-212ENST00000443561 ZNF727A8MUV8 499 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 CIDEAO60543 219 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 CCL18P55774 89 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
PDLIM2-212ENST00000443561 RPL23P62829 140 aaKnown RBP8.78□□□□□ -1
PDLIM2-212ENST00000443561 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
PDLIM2-212ENST00000443561 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 SYT8Q8NBV8 401 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 CNFNQ9BYD5 112 aa8.78□□□□□ -1
PDLIM2-212ENST00000443561 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 SSTP61278 116 aa8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 RHOHQ15669 191 aa8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 CLLU1Q5K131 121 aa8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 NEGR1Q7Z3B1 354 aa8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 WFDC10BQ8IUB3 73 aa8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 ISOC2Q96AB3 205 aa8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 DAZAP1Q96EP5 407 aaKnown RBP8.77□□□□□ -1.01
PDLIM2-212ENST00000443561 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
PDLIM2-212ENST00000443561 RHODO00212 210 aa8.76□□□□□ -1.01
PDLIM2-212ENST00000443561 SRIP30626 198 aa8.76□□□□□ -1.01
PDLIM2-212ENST00000443561 V9GYV3 84 aa8.76□□□□□ -1.01
PDLIM2-212ENST00000443561 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 PKD1P98161 4303 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 GAGE1Q13065 139 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 GAGE4Q13068 117 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 GAGE5Q13069 117 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 GAGE13Q4V321 117 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 SPANXN1Q5VSR9 72 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 Q9H8V8 135 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 BIN3Q9NQY0 253 aa8.75□□□□□ -1.01
PDLIM2-212ENST00000443561 GATCO43716 136 aaKnown RBP8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 EVI2AP22794 236 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 TIRAPP58753 221 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 PEA15Q15121 130 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 CT83Q5H943 113 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 Q8N3U1 123 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 NEXN-AS1Q8NBZ9 246 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
PDLIM2-212ENST00000443561 NTF3P20783 257 aa8.73□□□□□ -1.01
PDLIM2-212ENST00000443561 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
PDLIM2-212ENST00000443561 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
PDLIM2-212ENST00000443561 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
PDLIM2-212ENST00000443561 SMDT1Q9H4I9 107 aa8.73□□□□□ -1.01
PDLIM2-212ENST00000443561 NAT8Q9UHE5 227 aa8.73□□□□□ -1.01
PDLIM2-212ENST00000443561 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 A0A1W2PPQ1 181 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 ADCYAP1P18509 176 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 ERVFC1-1P60608 527 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 RAB4BP61018 213 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 CACNG7P62955 275 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 OR10G8Q8NGN5 311 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 AP1S3Q96PC3 154 aa8.72□□□□□ -1.01
PDLIM2-212ENST00000443561 XKRY2A2RUG3 117 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 F2Z2F3 143 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 UBE2D3P61077 147 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 UBE2D2P62837 147 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 ADIRFQ15847 76 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 ZNF56Q15929 161 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 WDR73Q6P4I2 378 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 Q6ZRN7 208 aaPredicted RBP8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 ATP6V0E2Q8NHE4 81 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 PGLYRP4Q96LB8 373 aa8.71□□□□□ -1.02
PDLIM2-212ENST00000443561 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 M0QY20 66 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 SIVA1O15304 175 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 SUMO4Q6EEV6 95 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 TSKUQ8WUA8 353 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
PDLIM2-212ENST00000443561 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
PDLIM2-212ENST00000443561 HIGD1CA8MV81 97 aa8.69□□□□□ -1.02
PDLIM2-212ENST00000443561 A8MWL6 223 aa8.69□□□□□ -1.02
PDLIM2-212ENST00000443561 GAS8-AS1O95177 125 aa8.69□□□□□ -1.02
PDLIM2-212ENST00000443561 LELP1Q5T871 98 aa8.69□□□□□ -1.02
PDLIM2-212ENST00000443561 MGPP08493 103 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 RAB14P61106 215 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 SH2D6Q7Z4S9 175 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 GFRA4Q9GZZ7 299 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
PDLIM2-212ENST00000443561 TRBV7-3A0A075B6L6 115 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms