RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MSRB1Q9NZV6 116 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 RYR1P21817 5038 aa14.28□□□□□ -0.12
CDKN3-204ENST00000442975 IFNA1P01562 189 aa14.28□□□□□ -0.12
CDKN3-204ENST00000442975 C9orf62Q8N4C0 152 aa14.28□□□□□ -0.12
CDKN3-204ENST00000442975 C10orf126Q8N4M7 172 aa14.28□□□□□ -0.12
CDKN3-204ENST00000442975 ERVFC1-1P60608 527 aa14.27□□□□□ -0.13
CDKN3-204ENST00000442975 LELP1Q5T871 98 aa14.27□□□□□ -0.13
CDKN3-204ENST00000442975 GTSF1LQ9H1H1 148 aa14.27□□□□□ -0.13
CDKN3-204ENST00000442975 K7EP13 123 aa14.26□□□□□ -0.13
CDKN3-204ENST00000442975 MEF2BQ02080 365 aaPredicted RBP14.26□□□□□ -0.13
CDKN3-204ENST00000442975 SFRP2Q96HF1 295 aa14.26□□□□□ -0.13
CDKN3-204ENST00000442975 IGHV3-30P01768 117 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 IGHV3-33P01772 117 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 IGHV3-30-3P0DP02 117 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 IGHV3-30-5P0DP03 117 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 BCL2P10415 239 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 KRTAP10-2P60368 255 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 LINC01556Q5JQF7 62 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 OR10AG1Q8NH19 301 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 Q9UF83 564 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 DNAH5Q8TE73 4624 aa14.25□□□□□ -0.13
CDKN3-204ENST00000442975 MUC21A0A0G2JKD1 596 aa14.24□□□□□ -0.13
CDKN3-204ENST00000442975 MUC21A0A140T8X8 626 aa14.24□□□□□ -0.13
CDKN3-204ENST00000442975 CXCL1P09341 107 aa14.24□□□□□ -0.13
CDKN3-204ENST00000442975 LINC00694P0DN24 101 aa14.24□□□□□ -0.13
CDKN3-204ENST00000442975 EREGO14944 169 aa14.23□□□□□ -0.13
CDKN3-204ENST00000442975 PDE6DO43924 150 aa14.23□□□□□ -0.13
CDKN3-204ENST00000442975 GNG4P50150 75 aa14.23□□□□□ -0.13
CDKN3-204ENST00000442975 SSTP61278 116 aa14.23□□□□□ -0.13
CDKN3-204ENST00000442975 RAB19A4D1S5 217 aa14.22□□□□□ -0.13
CDKN3-204ENST00000442975 SPANXN1Q5VSR9 72 aa14.22□□□□□ -0.13
CDKN3-204ENST00000442975 TPPP3Q9BW30 176 aa14.22□□□□□ -0.13
CDKN3-204ENST00000442975 Q9HAA7 133 aa14.22□□□□□ -0.13
CDKN3-204ENST00000442975 MED9Q9NWA0 146 aa14.22□□□□□ -0.13
CDKN3-204ENST00000442975 HSPG2P98160 4391 aa14.21□□□□□ -0.13
CDKN3-204ENST00000442975 ZNF56Q15929 161 aa14.21□□□□□ -0.13
CDKN3-204ENST00000442975 DAZAP1Q96EP5 407 aaKnown RBP14.21□□□□□ -0.13
CDKN3-204ENST00000442975 VAX2Q9UIW0 290 aa14.21□□□□□ -0.13
CDKN3-204ENST00000442975 ALKAL2Q6UX46 152 aa14.2□□□□□ -0.14
CDKN3-204ENST00000442975 BOLA1Q9Y3E2 137 aa14.2□□□□□ -0.14
CDKN3-204ENST00000442975 APOBP04114 4563 aaKnown RBP14.19□□□□□ -0.14
CDKN3-204ENST00000442975 SNAI2O43623 268 aa14.19□□□□□ -0.14
CDKN3-204ENST00000442975 PSCAO43653 123 aa14.19□□□□□ -0.14
CDKN3-204ENST00000442975 OR5AL1P0C617 328 aa14.19□□□□□ -0.14
CDKN3-204ENST00000442975 GZMBP10144 247 aa14.19□□□□□ -0.14
CDKN3-204ENST00000442975 FUSP35637 526 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDKN3-204ENST00000442975 Q8N3U1 123 aa14.19□□□□□ -0.14
CDKN3-204ENST00000442975 IGLV2-8P01709 118 aa14.18□□□□□ -0.14
CDKN3-204ENST00000442975 OR2D3Q8NGH3 330 aa14.18□□□□□ -0.14
CDKN3-204ENST00000442975 TRBV20OR9-2A0A075B6H5 130 aa14.17□□□□□ -0.14
CDKN3-204ENST00000442975 A0A087WTM6 91 aa14.17□□□□□ -0.14
CDKN3-204ENST00000442975 A0A087WWC5 75 aa14.17□□□□□ -0.14
CDKN3-204ENST00000442975 TAGLN2P37802 199 aaKnown RBP14.17□□□□□ -0.14
CDKN3-204ENST00000442975 NKX2-5P52952 324 aaPredicted RBP14.17□□□□□ -0.14
CDKN3-204ENST00000442975 RPL36AP83881 106 aaKnown RBP14.17□□□□□ -0.14
CDKN3-204ENST00000442975 RPL36ALQ969Q0 106 aaKnown RBP14.17□□□□□ -0.14
CDKN3-204ENST00000442975 SMIM12Q96EX1 92 aa14.17□□□□□ -0.14
CDKN3-204ENST00000442975 TRBV10-1A0A0K0K1A3 114 aa14.16□□□□□ -0.14
CDKN3-204ENST00000442975 IBA57-AS1B1ANH7 110 aa14.16□□□□□ -0.14
CDKN3-204ENST00000442975 P01737 135 aa14.16□□□□□ -0.14
CDKN3-204ENST00000442975 AP1S3Q96PC3 154 aa14.16□□□□□ -0.14
CDKN3-204ENST00000442975 SSBP4Q9BWG4 385 aaPredicted RBP14.16□□□□□ -0.14
CDKN3-204ENST00000442975 PCLOQ9Y6V0 5065 aa14.15□□□□□ -0.14
CDKN3-204ENST00000442975 RBFOX3A6NFN3 312 aa14.15□□□□□ -0.14
CDKN3-204ENST00000442975 F5H697 171 aa14.15□□□□□ -0.14
CDKN3-204ENST00000442975 SMIM17P0DL12 118 aa14.15□□□□□ -0.14
CDKN3-204ENST00000442975 RPS20P60866 119 aaKnown RBP14.15□□□□□ -0.14
CDKN3-204ENST00000442975 RAB4BP61018 213 aa14.15□□□□□ -0.14
CDKN3-204ENST00000442975 FER1L6-AS1Q8NA97 138 aa14.15□□□□□ -0.14
CDKN3-204ENST00000442975 A0A1B0GVG6 124 aa14.14□□□□□ -0.15
CDKN3-204ENST00000442975 C19orf71A6NCJ1 209 aa14.14□□□□□ -0.15
CDKN3-204ENST00000442975 CDK2AP2O75956 126 aa14.14□□□□□ -0.15
CDKN3-204ENST00000442975 URGCP-MRPS24S4R325 110 aa14.14□□□□□ -0.15
CDKN3-204ENST00000442975 TRBV7-3A0A075B6L6 115 aa14.13□□□□□ -0.15
CDKN3-204ENST00000442975 XKRY2A2RUG3 117 aa14.13□□□□□ -0.15
CDKN3-204ENST00000442975 UBE2D3P61077 147 aa14.13□□□□□ -0.15
CDKN3-204ENST00000442975 UBE2D2P62837 147 aa14.13□□□□□ -0.15
CDKN3-204ENST00000442975 BLOC1S1P78537 153 aa14.13□□□□□ -0.15
CDKN3-204ENST00000442975 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
CDKN3-204ENST00000442975 LAGE3Q14657 143 aa14.12□□□□□ -0.15
CDKN3-204ENST00000442975 DAZ4Q86SG3 579 aaKnown RBP14.12□□□□□ -0.15
CDKN3-204ENST00000442975 DAZ3Q9NR90 486 aaKnown RBP14.12□□□□□ -0.15
CDKN3-204ENST00000442975 PGPEP1Q9NXJ5 209 aa14.12□□□□□ -0.15
CDKN3-204ENST00000442975 MGPP08493 103 aa14.11□□□□□ -0.15
CDKN3-204ENST00000442975 IGLC6P0CF74 106 aa14.11□□□□□ -0.15
CDKN3-204ENST00000442975 CDPF1Q6NVV7 123 aa14.11□□□□□ -0.15
CDKN3-204ENST00000442975 NEXN-AS1Q8NBZ9 246 aa14.11□□□□□ -0.15
CDKN3-204ENST00000442975 CEBPGP53567 150 aa14.1□□□□□ -0.15
CDKN3-204ENST00000442975 OR10G8Q8NGN5 311 aa14.1□□□□□ -0.15
CDKN3-204ENST00000442975 CACNG7P62955 275 aa14.09□□□□□ -0.15
CDKN3-204ENST00000442975 KCNIP4Q6PIL6 250 aa14.09□□□□□ -0.15
CDKN3-204ENST00000442975 ABCA13Q86UQ4 5058 aa14.09□□□□□ -0.15
CDKN3-204ENST00000442975 A0A087WX48 190 aa14.08□□□□□ -0.16
CDKN3-204ENST00000442975 TOR2AQ5JU69 321 aa14.08□□□□□ -0.16
CDKN3-204ENST00000442975 NIT1Q86X76 327 aa14.08□□□□□ -0.16
CDKN3-204ENST00000442975 MAPKAPK5-AS1Q8N8E1 139 aa14.08□□□□□ -0.16
CDKN3-204ENST00000442975 K7EN84 100 aa14.07□□□□□ -0.16
CDKN3-204ENST00000442975 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.07□□□□□ -0.16
CDKN3-204ENST00000442975 NUDT10Q8NFP7 164 aa14.07□□□□□ -0.16
CDKN3-204ENST00000442975 NUDT11Q96G61 164 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms