RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 TRBV6-4A0A1B0GX49 114 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 A0A1W2PPQ1 181 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 F2Z2F3 143 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 NXPH4O95158 308 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 ESRGQ1W209 222 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 Q6ZSN1 163 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
USP1-203ENST00000442679 LOC100131303A0A0U1RQF7 123 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 K7EQD1 137 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 RHODO00212 210 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 CRYGDP07320 174 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 PRADC1Q9BSG0 188 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
USP1-203ENST00000442679 A8MWL6 223 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 SRIP30626 198 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 FAM3BP58499 235 aaPredicted RBP8.53□□□□□ -1.04
USP1-203ENST00000442679 RPL23P62829 140 aaKnown RBP8.53□□□□□ -1.04
USP1-203ENST00000442679 CACNG7P62955 275 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 RHOHQ15669 191 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 ADIRFQ15847 76 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 NEGR1Q7Z3B1 354 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 OSTCQ9NRP0 149 aa8.53□□□□□ -1.04
USP1-203ENST00000442679 CT83Q5H943 113 aa8.52□□□□□ -1.05
USP1-203ENST00000442679 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
USP1-203ENST00000442679 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
USP1-203ENST00000442679 C14orf178Q8N769 122 aaPredicted RBP8.52□□□□□ -1.05
USP1-203ENST00000442679 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
USP1-203ENST00000442679 ISOC2Q96AB3 205 aa8.52□□□□□ -1.05
USP1-203ENST00000442679 MSRB1Q9NZV6 116 aa8.52□□□□□ -1.05
USP1-203ENST00000442679 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 NTF3P20783 257 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 CTRLP40313 264 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 ZNRF2Q8NHG8 242 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 GTSF1Q8WW33 167 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
USP1-203ENST00000442679 MRPS16Q9Y3D3 137 aaKnown RBP8.51□□□□□ -1.05
USP1-203ENST00000442679 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 IGLV2-18A0A075B6J9 118 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 RAB4BP61018 213 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 TWIST1Q15672 202 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 OR10G8Q8NGN5 311 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 PGLYRP4Q96LB8 373 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
USP1-203ENST00000442679 GAGE12JA6NER3 117 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 F5H697 171 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 M0R2N4 97 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 TRGC1P0CF51 173 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
USP1-203ENST00000442679 GAGE1Q13065 139 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 GAGE4Q13068 117 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 GAGE5Q13069 117 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 ZNF56Q15929 161 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 Q9H8V8 135 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 Q9UF83 564 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 V9GYV3 84 aa8.49□□□□□ -1.05
USP1-203ENST00000442679 LINC00315P59091 139 aa8.48□□□□□ -1.05
USP1-203ENST00000442679 UQCC3Q6UW78 93 aa8.48□□□□□ -1.05
USP1-203ENST00000442679 UPK3BQ9BT76 320 aa8.48□□□□□ -1.05
USP1-203ENST00000442679 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
USP1-203ENST00000442679 NACAE9PAV3 2078 aa8.48□□□□□ -1.05
USP1-203ENST00000442679 FAM231BA6NCW3 169 aa8.47□□□□□ -1.05
USP1-203ENST00000442679 MGPP08493 103 aa8.47□□□□□ -1.05
USP1-203ENST00000442679 EVI2AP22794 236 aa8.47□□□□□ -1.05
USP1-203ENST00000442679 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
USP1-203ENST00000442679 BORCS7Q96B45 105 aa8.47□□□□□ -1.05
USP1-203ENST00000442679 TRBV10-1A0A0K0K1A3 114 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 TIRAPP58753 221 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 COMMD7Q86VX2 200 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 DPH3P1Q9H4G8 78 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.06
USP1-203ENST00000442679 DNAH17Q9UFH2 4485 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 NBDYA0A0U1RRE5 68 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 TMEM218A2RU14 115 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 LINC00862A6NCI5 91 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 LINC00694P0DN24 101 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 RPL36AP83881 106 aaKnown RBP8.45□□□□□ -1.06
USP1-203ENST00000442679 Q6ZR54 194 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
USP1-203ENST00000442679 RPL36ALQ969Q0 106 aaKnown RBP8.45□□□□□ -1.06
USP1-203ENST00000442679 TRBV7-3A0A075B6L6 115 aa8.44□□□□□ -1.06
USP1-203ENST00000442679 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
USP1-203ENST00000442679 SIVA1O15304 175 aa8.44□□□□□ -1.06
USP1-203ENST00000442679 PNRC1Q12796 327 aaPredicted RBP8.44□□□□□ -1.06
USP1-203ENST00000442679 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
USP1-203ENST00000442679 NEXN-AS1Q8NBZ9 246 aa8.44□□□□□ -1.06
USP1-203ENST00000442679 NAT8BQ9UHF3 227 aa8.44□□□□□ -1.06
USP1-203ENST00000442679 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
USP1-203ENST00000442679 F8W036 122 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms