RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 RAB9AP51151 201 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 TP53TG1Q9Y2A0 90 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 MOB4Q9Y3A3 225 aa9.88□□□□□ -0.83
SLC48A1-201ENST00000442218 APCP25054 2843 aa9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 TRAV21A0A0B4J279 112 aa9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 LGALS1P09382 135 aaKnown RBP9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 LINC01549A6NIU2 74 aa9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 ZFP2Q6ZN57 461 aa9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 DPH3P1Q9H4G8 78 aa9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
SLC48A1-201ENST00000442218 MYMXA0A1B0GTQ4 84 aa9.86□□□□□ -0.83
SLC48A1-201ENST00000442218 ATP5J2P56134 94 aa9.86□□□□□ -0.83
SLC48A1-201ENST00000442218 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
SLC48A1-201ENST00000442218 A0A1B0GWB2 263 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 C11orf86A6NJI1 115 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 AZU1P20160 251 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 U3KQE9 123 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 E9PLD3 99 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 FOXI2Q6ZQN5 318 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 HIGD1BQ9P298 99 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 PLNP26678 52 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 PSMB2P49721 201 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 SRSF2Q01130 221 aaKnown RBP9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 NEXN-AS1Q8NBZ9 246 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
SLC48A1-201ENST00000442218 FLNAP21333 2647 aaKnown RBP9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 IGHV1-69DA0A0B4J2H0 117 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 IGHV1-69P01742 117 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 PSMG4Q5JS54 123 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 ADARB2-AS1A8MUL3 147 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 TOMM6Q96B49 74 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 SPAG8Q99932 426 aaPredicted RBP9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 ZNF580Q9UK33 172 aa9.84□□□□□ -0.83
SLC48A1-201ENST00000442218 TRBV7-3A0A075B6L6 115 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 TSHBP01222 138 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 TSPEAR-AS2P59090 65 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 SPINK13Q1W4C9 94 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 FAM159AQ6UWV7 190 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 ZNF56Q15929 161 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 ITPR2Q14571 2701 aa9.83□□□□□ -0.84
SLC48A1-201ENST00000442218 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 CRYGDP07320 174 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 GAGE13Q4V321 117 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 MORN3Q6PF18 240 aaPredicted RBP9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 CLEC2AQ6UVW9 174 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 MRAP2Q96G30 205 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 RRN3P1Q2M238 152 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 SAMD13Q5VXD3 122 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 ITPR3Q14573 2671 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 SOCS3O14543 225 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 P0DMU3 169 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
SLC48A1-201ENST00000442218 TENM4Q6N022 2769 aa9.81□□□□□ -0.84
SLC48A1-201ENST00000442218 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
SLC48A1-201ENST00000442218 KNCNA6PVL3 124 aa9.81□□□□□ -0.84
SLC48A1-201ENST00000442218 RAX2Q96IS3 184 aa9.81□□□□□ -0.84
SLC48A1-201ENST00000442218 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
SLC48A1-201ENST00000442218 C10orf105Q8TEF2 133 aa9.81□□□□□ -0.84
SLC48A1-201ENST00000442218 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 PIMREGQ9BSJ6 248 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 NDUFA4O00483 81 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 PROK1P58294 105 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 NPC2P61916 151 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 Q9UF83 564 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 FAM223BA6NKX1 122 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 OVOL1O14753 267 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 IGHV4-59P01825 116 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 FAM223AQ8IWN6 122 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 DUX3Q96PT4 197 aa9.8□□□□□ -0.84
SLC48A1-201ENST00000442218 IGHV4-4A0A075B6R2 117 aa9.79□□□□□ -0.84
SLC48A1-201ENST00000442218 GAGE12HA6NDE8 117 aa9.79□□□□□ -0.84
SLC48A1-201ENST00000442218 COX6B1P14854 86 aa9.79□□□□□ -0.84
SLC48A1-201ENST00000442218 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 SYNJ2BPP57105 145 aa9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 LINC00315P59091 139 aa9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 DEFB136Q30KP8 78 aa9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 TMEM190Q8WZ59 177 aa9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 MRPL53Q96EL3 112 aaKnown RBP9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 BEX4Q9NWD9 120 aaPredicted RBP9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 KRTAP10-9P60411 292 aa9.78□□□□□ -0.84
SLC48A1-201ENST00000442218 Q8N1Y9 231 aa9.77□□□□□ -0.84
SLC48A1-201ENST00000442218 TSPAN13O95857 204 aa9.77□□□□□ -0.85
SLC48A1-201ENST00000442218 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
SLC48A1-201ENST00000442218 C19orf54Q5BKX5 351 aa9.77□□□□□ -0.85
SLC48A1-201ENST00000442218 KIR2DL4Q99706 377 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms