RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 GCHFRP30047 84 aa13.21□□□□□ -0.29
TRIM39-210ENST00000440271 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
TRIM39-210ENST00000440271 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
TRIM39-210ENST00000440271 A0A0D9SG52 128 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 HLA-DQA1P01909 254 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 UBE2D3P61077 147 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 UBE2D2P62837 147 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 ZC2HC1AQ96GY0 325 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 SFRP2Q96HF1 295 aa13.2□□□□□ -0.3
TRIM39-210ENST00000440271 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 B4DEV8 164 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 PET100P0DJ07 73 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 RPL36AP83881 106 aaKnown RBP13.19□□□□□ -0.3
TRIM39-210ENST00000440271 DNLZQ5SXM8 178 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 OR11H4Q8NGC9 324 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 RPL36ALQ969Q0 106 aaKnown RBP13.19□□□□□ -0.3
TRIM39-210ENST00000440271 RAB24Q969Q5 203 aa13.19□□□□□ -0.3
TRIM39-210ENST00000440271 TRBV7-3A0A075B6L6 115 aa13.18□□□□□ -0.3
TRIM39-210ENST00000440271 TRBV6-8A0A0A6YYG3 113 aa13.18□□□□□ -0.3
TRIM39-210ENST00000440271 TRAV34A0A0B4J273 112 aa13.18□□□□□ -0.3
TRIM39-210ENST00000440271 ANGP03950 147 aaKnown RBP13.18□□□□□ -0.3
TRIM39-210ENST00000440271 MPV17L2Q567V2 206 aa13.18□□□□□ -0.3
TRIM39-210ENST00000440271 ARL2-SNX15V9GYD0 113 aa13.18□□□□□ -0.3
TRIM39-210ENST00000440271 TNXBP22105 4242 aa13.17□□□□□ -0.3
TRIM39-210ENST00000440271 KRBOX1C9JBD0 128 aa13.17□□□□□ -0.3
TRIM39-210ENST00000440271 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
TRIM39-210ENST00000440271 RPL19P84098 196 aaKnown RBP13.16□□□□□ -0.3
TRIM39-210ENST00000440271 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
TRIM39-210ENST00000440271 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
TRIM39-210ENST00000440271 M0R036 132 aa13.15□□□□□ -0.3
TRIM39-210ENST00000440271 CRIP1P50238 77 aa13.15□□□□□ -0.3
TRIM39-210ENST00000440271 MIAQ16674 131 aa13.15□□□□□ -0.3
TRIM39-210ENST00000440271 PHLDA3Q9Y5J5 127 aa13.15□□□□□ -0.3
TRIM39-210ENST00000440271 M0R381 172 aa13.14□□□□□ -0.31
TRIM39-210ENST00000440271 OR10G8Q8NGN5 311 aa13.14□□□□□ -0.31
TRIM39-210ENST00000440271 CXorf1O96002 111 aa13.13□□□□□ -0.31
TRIM39-210ENST00000440271 CIRBPQ14011 172 aaKnown RBP13.13□□□□□ -0.31
TRIM39-210ENST00000440271 A0A1W2PRE2 83 aa13.12□□□□□ -0.31
TRIM39-210ENST00000440271 INMT-MINDY4F8WBC2 141 aa13.12□□□□□ -0.31
TRIM39-210ENST00000440271 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
TRIM39-210ENST00000440271 KRTAP26-1Q6PEX3 210 aa13.12□□□□□ -0.31
TRIM39-210ENST00000440271 HSD17B11Q8NBQ5 300 aa13.12□□□□□ -0.31
TRIM39-210ENST00000440271 CHCHD5Q9BSY4 110 aa13.12□□□□□ -0.31
TRIM39-210ENST00000440271 SH2D1AO60880 128 aa13.11□□□□□ -0.31
TRIM39-210ENST00000440271 PTTG1O95997 202 aa13.11□□□□□ -0.31
TRIM39-210ENST00000440271 Q86TA4 180 aa13.11□□□□□ -0.31
TRIM39-210ENST00000440271 DPH3Q96FX2 82 aa13.11□□□□□ -0.31
TRIM39-210ENST00000440271 PRR34Q9NV39 138 aa13.11□□□□□ -0.31
TRIM39-210ENST00000440271 SSNA1O43805 119 aa13.1□□□□□ -0.31
TRIM39-210ENST00000440271 IFNA7P01567 189 aa13.1□□□□□ -0.31
TRIM39-210ENST00000440271 PKIAP61925 76 aa13.1□□□□□ -0.31
TRIM39-210ENST00000440271 ZFP82Q8N141 532 aa13.1□□□□□ -0.31
TRIM39-210ENST00000440271 CLRN3Q8NCR9 226 aa13.1□□□□□ -0.31
TRIM39-210ENST00000440271 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-210ENST00000440271 MBP02144 154 aa13.09□□□□□ -0.31
TRIM39-210ENST00000440271 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
TRIM39-210ENST00000440271 CLPSL2Q6UWE3 100 aa13.09□□□□□ -0.31
TRIM39-210ENST00000440271 NEXN-AS1Q8NBZ9 246 aa13.09□□□□□ -0.31
TRIM39-210ENST00000440271 ACTR3CQ9C0K3 210 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-210ENST00000440271 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
TRIM39-210ENST00000440271 TMSB15BA0A087X1C1 80 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 PEX7O00628 323 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 RAB4BP61018 213 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 CNBPP62633 177 aaKnown RBP13.08□□□□□ -0.32
TRIM39-210ENST00000440271 SERF2P84101 59 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 LINC00269Q8N2A0 174 aa13.08□□□□□ -0.32
TRIM39-210ENST00000440271 A0A087WYN8 130 aa13.07□□□□□ -0.32
TRIM39-210ENST00000440271 PRR27Q6MZM9 219 aa13.07□□□□□ -0.32
TRIM39-210ENST00000440271 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
TRIM39-210ENST00000440271 RBX1P62877 108 aa13.06□□□□□ -0.32
TRIM39-210ENST00000440271 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
TRIM39-210ENST00000440271 NTM-AS1Q6ZSK4 140 aa13.06□□□□□ -0.32
TRIM39-210ENST00000440271 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.06□□□□□ -0.32
TRIM39-210ENST00000440271 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
TRIM39-210ENST00000440271 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
TRIM39-210ENST00000440271 TNFSF18Q9UNG2 199 aa13.06□□□□□ -0.32
TRIM39-210ENST00000440271 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
TRIM39-210ENST00000440271 UBE2G2P60604 165 aa13.05□□□□□ -0.32
TRIM39-210ENST00000440271 ZNF56Q15929 161 aa13.05□□□□□ -0.32
TRIM39-210ENST00000440271 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
TRIM39-210ENST00000440271 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
TRIM39-210ENST00000440271 IGHV3-64A0A075B6Q5 118 aa13.04□□□□□ -0.32
TRIM39-210ENST00000440271 hDV102S1A0JD36 115 aa13.04□□□□□ -0.32
TRIM39-210ENST00000440271 ODF1Q14990 250 aa13.04□□□□□ -0.32
TRIM39-210ENST00000440271 ZNF674Q2M3X9 581 aa13.04□□□□□ -0.32
TRIM39-210ENST00000440271 S100ZQ8WXG8 99 aa13.04□□□□□ -0.32
TRIM39-210ENST00000440271 PHOX2AO14813 284 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 UPK1BO75841 260 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 GAGE6Q13070 117 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 TMEM97Q5BJF2 176 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 LINC00299Q6ZSB3 139 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 SPACA4Q8TDM5 124 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
TRIM39-210ENST00000440271 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
TRIM39-210ENST00000440271 SLPIP03973 132 aa13.02□□□□□ -0.33
TRIM39-210ENST00000440271 IFITM3Q01628 133 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms