RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GPHB5Q86YW7 130 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 LINC00469Q8N7U9 141 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 RNF185Q96GF1 192 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 MS4A6AQ9H2W1 248 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 MAP1LC3AQ9H492 121 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 ST20Q9HBF5 79 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 DAZ1Q9NQZ3 744 aaKnown RBP2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 UFC1Q9Y3C8 167 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 MRPS16Q9Y3D3 137 aaKnown RBP2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 TIMM8BQ9Y5J9 83 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 ANKRD11Q6UB99 2663 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 PTPRZ1P23471 2315 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 ACACAQ13085 2346 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 LINC01546A6NGU7 62 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 SNAI2O43623 268 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 NCR2O95944 276 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 NPYP01303 97 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 HBDP02042 147 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 PSMB8P28062 276 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 FCER1GP30273 86 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 TSPOP30536 169 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 RNASE4P34096 147 aaKnown RBP2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 LEPP41159 167 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 ASIPP42127 132 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 BATFQ16520 125 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 DEFB113Q30KQ7 82 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 C6orf226Q5I0X4 101 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 COL5A1-AS1Q5SY13 56 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 PRR9Q5T870 116 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 SPANXN1Q5VSR9 72 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 LINC01545Q5VT33 79 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 APRG1Q8IVJ8 170 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 ZFAND2AQ8N6M9 145 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 Q8N8P6 123 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 OR8A1Q8NGG7 326 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 OR1N2Q8NGR9 330 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 RASL10AQ92737 203 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 FAM19A4Q96LR4 140 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 PMCHL2Q9BQD1 86 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 VPREB3Q9UKI3 123 aa2.5□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGKV3-7A0A075B6H7 116 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 A0A096LNJ9 63 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 H3BVH4 76 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 LGALS9O00182 355 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 GNRH2O43555 120 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 PPP1R17O96001 155 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 LGALS1P09382 135 aaKnown RBP2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 ZNF25P17030 456 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 EVI2AP22794 236 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 S100A4P26447 101 aaKnown RBP2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 HINT1P49773 126 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 FXYD7P58549 80 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 LAGE3Q14657 143 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 LGALS9BQ3B8N2 356 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 PSMG4Q5JS54 123 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 LGALS9CQ6DKI2 356 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 SLC25A34Q6PIV7 304 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 Q6ZQT7 251 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 DEFB125Q8N687 156 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 TEX29Q8N6K0 151 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 OR2K2Q8NGT1 345 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 DCANP1Q8TF63 244 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 IFI27L1Q96BM0 104 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 MRAP2Q96G30 205 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 UBE2E2Q96LR5 201 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 ZNF702PQ9H963 129 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 GOLT1BQ9Y3E0 138 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 PHLDA3Q9Y5J5 127 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 VPS13AQ96RL7 3174 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 ARHGAP32A7KAX9 2087 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 PKDREJQ9NTG1 2253 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 CFAP54Q96N23 3096 aa2.49□□□□□ -2.01
HMGB3P11-201ENST00000440127 ROS1P08922 2347 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 FREM2Q5SZK8 3169 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 NAV3Q8IVL0 2385 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGLV2-18A0A075B6J9 118 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGHV3OR16-12A0A075B7B8 117 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 A0A0J9YX75 114 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 KLLNB2CW77 178 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 F6UB75 175 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 M0R381 172 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 ATP5LO75964 103 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 DUSP14O95147 198 aaKnown RBP2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 SMIM17P0DL12 118 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 COX8AP10176 69 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 G0S2P27469 103 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 TFPI2P48307 235 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 NDUFV3P56181 108 aaKnown RBP2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 DEFB1P60022 68 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 SNRPD3P62318 126 aaKnown RBP2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 ORMDL2Q53FV1 153 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 TCTEX1D4Q5JR98 221 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 C10orf99Q6UWK7 81 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 C12orf54Q6X4T0 127 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 MYOZ3Q8TDC0 251 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 TMEM158Q8WZ71 300 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 ODF3Q96PU9 254 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms