RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 PTH2Q96A98 100 aa8.12□□□□□ -1.11
LINC00539-203ENST00000434601 RNF185Q96GF1 192 aa8.12□□□□□ -1.11
LINC00539-203ENST00000434601 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
LINC00539-203ENST00000434601 MUC4Q99102 2169 aa8.12□□□□□ -1.11
LINC00539-203ENST00000434601 LCE6AA0A183 80 aa8.11□□□□□ -1.11
LINC00539-203ENST00000434601 SMIM17P0DL12 118 aa8.11□□□□□ -1.11
LINC00539-203ENST00000434601 DEFB135Q30KP9 77 aa8.11□□□□□ -1.11
LINC00539-203ENST00000434601 ZNF876PQ49A33 203 aa8.11□□□□□ -1.11
LINC00539-203ENST00000434601 SMIM9A6NGZ8 99 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 S100A6P06703 90 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 MGPP08493 103 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 RAB4AP20338 218 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 Q6ZWC4 215 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 ORMDL3Q8N138 153 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
LINC00539-203ENST00000434601 TM2D3Q9BRN9 247 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 ALKBH7Q9BT30 221 aaPredicted RBP8.1□□□□□ -1.11
LINC00539-203ENST00000434601 NDUFAF3Q9BU61 184 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 X6R8D5 127 aa8.1□□□□□ -1.11
LINC00539-203ENST00000434601 PLAC8L1A1L4L8 177 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 A8MWV9 139 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 D6R8Y8 96 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 NDUFA6P56556 154 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
LINC00539-203ENST00000434601 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 JPT2Q9H910 190 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 MRPL16Q9NX20 251 aaKnown RBP8.09□□□□□ -1.11
LINC00539-203ENST00000434601 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.11
LINC00539-203ENST00000434601 CSMD3Q7Z407 3707 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 A0A087WWL8 130 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 SMKR1H3BMG3 65 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 NCR2O95944 276 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 PPBPP02775 128 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 CKS2P33552 79 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 Q0VG73 95 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 COA6Q5JTJ3 125 aaKnown RBP8.08□□□□□ -1.12
LINC00539-203ENST00000434601 POM121L12Q8N7R1 296 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 OR11H2Q8NH07 326 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 RNF183Q96D59 192 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 MRAP2Q96G30 205 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 LYSTQ99698 3801 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
LINC00539-203ENST00000434601 CRYGDP07320 174 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 LINC00315P59091 139 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 LGALS9BQ3B8N2 356 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 FAM74A4Q5TZK3 123 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 RASL10AQ92737 203 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 PRELID3AQ96N28 172 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 OVOL2Q9BRP0 275 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 SAMD10Q9BYL1 202 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 EDA2RQ9HAV5 297 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 NOP10Q9NPE3 64 aaKnown RBP8.07□□□□□ -1.12
LINC00539-203ENST00000434601 LAMTOR2Q9Y2Q5 125 aa8.07□□□□□ -1.12
LINC00539-203ENST00000434601 HUWE1Q7Z6Z7 4374 aaKnown RBP8.06□□□□□ -1.12
LINC00539-203ENST00000434601 TRAV26-2A0A0B4J265 109 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 C5orf52A6NGY3 159 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 RHODO00212 210 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 NPYP01303 97 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 MIFP14174 115 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 ZNF56Q15929 161 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 IQCJQ1A5X6 159 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 ZFAND6Q6FIF0 208 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 Q6ZTI0 123 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 BAGE3Q86Y29 109 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 TP53TG1Q9Y2A0 90 aa8.06□□□□□ -1.12
LINC00539-203ENST00000434601 RS1O15537 224 aa8.05□□□□□ -1.12
LINC00539-203ENST00000434601 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
LINC00539-203ENST00000434601 EMP1P54849 157 aa8.05□□□□□ -1.12
LINC00539-203ENST00000434601 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
LINC00539-203ENST00000434601 SUMO4Q6EEV6 95 aa8.05□□□□□ -1.12
LINC00539-203ENST00000434601 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
LINC00539-203ENST00000434601 NRACQ8N912 160 aa8.05□□□□□ -1.12
LINC00539-203ENST00000434601 RYR2Q92736 4967 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 F5H697 171 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 SERF1AO75920 110 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 GATA1P15976 413 aaPredicted RBP8.04□□□□□ -1.12
LINC00539-203ENST00000434601 HOXA5P20719 270 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 LINC00310P59036 64 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 Q8NAQ8 132 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 MAP1LC3AQ9H492 121 aa8.04□□□□□ -1.12
LINC00539-203ENST00000434601 DYNC2H1Q8NCM8 4307 aaKnown RBP8.04□□□□□ -1.12
LINC00539-203ENST00000434601 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 GAGE7O76087 117 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 PPP1R17O96001 155 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 RETNQ9HD89 108 aa8.03□□□□□ -1.12
LINC00539-203ENST00000434601 NACAE9PAV3 2078 aa8.02□□□□□ -1.12
LINC00539-203ENST00000434601 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms