RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 IER3IP1Q9Y5U9 82 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 TPRP12270 2363 aaKnown RBP2.74□□□□□ -1.97
USP54-206ENST00000433394 PTPRQQ9UMZ3 2332 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 URB1O60287 2271 aaKnown RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 CPAMD8Q8IZJ3 1885 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 NCOR2Q9Y618 2525 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 ACACBO00763 2458 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 IGF2RP11717 2491 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 TRBV20OR9-2A0A075B6H5 130 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 TRAV41A0A0B4J266 112 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 A0A0J9YW62 118 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 LOC107984640A0A0U1RRK4 108 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 SPAARA0A1B0GVQ0 90 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 DPRXA6NFQ7 191 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 CST7O76096 145 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 CLPSP04118 112 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 SPINK8P0C7L1 97 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 COX6A1P12074 109 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 FABP2P12104 132 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 TMBIM6P55061 237 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 IQCJQ1A5X6 159 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 ZNF791Q3KP31 576 aaPredicted RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 RPS19BP1Q86WX3 136 aaKnown RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 PRR15Q8IV56 129 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 C10orf111Q8N326 155 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 DEFB124Q8NES8 71 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 OR2T10Q8NGZ9 312 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 MRPL30Q8TCC3 161 aaKnown RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 ZCCHC13Q8WW36 166 aaKnown RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 TSLPQ969D9 159 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 GPX7Q96SL4 187 aaPredicted RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 TXNDC17Q9BRA2 123 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 VAMP8Q9BV40 100 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 WDR61Q9GZS3 305 aaKnown RBP2.73□□□□□ -1.97
USP54-206ENST00000433394 TMEM133Q9H2Q1 129 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 BANF2Q9H503 90 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 RPRMQ9NS64 109 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 CBLN4Q9NTU7 201 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 FKBP11Q9NYL4 201 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 HHLA3Q9XRX5 114 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 DNAJC13O75165 2243 aa2.73□□□□□ -1.97
USP54-206ENST00000433394 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 A0A1B0GWA3 101 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 TRGC2P03986 189 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 SRP19P09132 144 aaKnown RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 PIPP12273 146 aaPredicted RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 IFITM1P13164 125 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 AQP4P55087 323 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 DSCR4P56555 118 aaPredicted RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 TMEM258P61165 79 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 SNRPGP62308 76 aaKnown RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 DEFA5Q01523 94 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 PLGLB1Q02325 96 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 CATR1Q13166 79 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 PEA15Q15121 130 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 MRPL54Q6P161 138 aaKnown RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 LYZL1Q6UWQ5 148 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 TMEM14EPQ6UXP3 125 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 LINC00305Q7Z4B0 112 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 OR10AC1Q8NH08 325 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 PSMF1Q92530 271 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 RNASE6Q93091 150 aaKnown RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 TOMM6Q96B49 74 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 MRPL32Q9BYC8 188 aaKnown RBP2.72□□□□□ -1.97
USP54-206ENST00000433394 MED13Q9UHV7 2174 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 TPRKBQ9Y3C4 175 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 FREM2Q5SZK8 3169 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 SPEGQ15772 3267 aa2.72□□□□□ -1.97
USP54-206ENST00000433394 PIEZO2Q9H5I5 2752 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 A0A087WXM4 84 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 TRAV17A0A0B4J275 112 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 MDFIC2A0A1B0GVS7 189 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 A0A1W2PRS3 328 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 A8MWV9 139 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 H3BRN7 92 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 PLA2G10O15496 165 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 NDUFB3O43676 98 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 APOC3P02656 99 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 PMP2P02689 132 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 CRYGSP22914 178 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 S100A4P26447 101 aaKnown RBP2.71□□□□□ -1.98
USP54-206ENST00000433394 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
USP54-206ENST00000433394 FAM74A1Q5RGS3 127 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 C1orf140Q5VVS0 124 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 Q5XG85 94 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 KTN1-AS1Q86SY8 53 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 C10orf126Q8N4M7 172 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 KCNRGQ8N5I3 272 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 ZNF563Q8TA94 476 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 HYLS1Q96M11 299 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 LINC00052Q96N35 136 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 NAA38Q9BRA0 125 aaKnown RBP2.71□□□□□ -1.98
USP54-206ENST00000433394 ADAT1Q9BUB4 502 aaKnown RBP2.71□□□□□ -1.98
USP54-206ENST00000433394 TTTY13Q9BZ97 58 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 TTTY12Q9BZ98 90 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 ATG5Q9H1Y0 275 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 SMCO4Q9NRQ5 59 aa2.71□□□□□ -1.98
USP54-206ENST00000433394 MPC1Q9Y5U8 109 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms