RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CUL9Q8IWT3 2517 aa8.72□□□□□ -1.01
HMGCS1-202ENST00000433297 IGIPA6NJ69 53 aa8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 CFAP161Q6P656 301 aa8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 Q8N9W7 124 aa8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 ZNF580Q9UK33 172 aa8.71□□□□□ -1.01
HMGCS1-202ENST00000433297 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
HMGCS1-202ENST00000433297 ZNF56Q15929 161 aa8.71□□□□□ -1.02
HMGCS1-202ENST00000433297 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
HMGCS1-202ENST00000433297 EEF1AKMT3Q96AZ1 226 aa8.71□□□□□ -1.02
HMGCS1-202ENST00000433297 SPTA1P02549 2419 aa8.71□□□□□ -1.02
HMGCS1-202ENST00000433297 TMEM263Q8WUH6 116 aaKnown RBP8.71□□□□□ -1.02
HMGCS1-202ENST00000433297 LY6G5BQ8NDX9 201 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 DUX3Q96PT4 197 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 ANKRD11Q6UB99 2663 aaPredicted RBP8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 H3BMM0 161 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 VCYO14598 125 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 PPP1R17O96001 155 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 FAM110DQ8TAY7 271 aaPredicted RBP8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 UBE2WQ96B02 151 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 CHCHD5Q9BSY4 110 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 BDP1A6H8Y1 2624 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 RNASE3P12724 160 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 SUMO4Q6EEV6 95 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 SPXQ9BT56 116 aa8.7□□□□□ -1.02
HMGCS1-202ENST00000433297 ANKHD1Q8IWZ3 2542 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-202ENST00000433297 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 TRIAP1O43715 76 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 Q6ZSV7 163 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 IGHV1-69DA0A0B4J2H0 117 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 FOXC1Q12948 553 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 PRR30Q53SZ7 412 aaPredicted RBP8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 TMEM141Q96I45 108 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 PTPRZ1P23471 2315 aaPredicted RBP8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 UNQ9165/PRO28630Q6UXU0 137 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 C9orf139Q6ZV77 190 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 MRPL53Q96EL3 112 aaKnown RBP8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 AMELXQ99217 191 aa8.68□□□□□ -1.02
HMGCS1-202ENST00000433297 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 TMEM219Q86XT9 240 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 TRBV10-2A0A0K0K1G8 114 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 Q8N6K4 173 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 CLEC2BQ92478 149 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 RIF1Q5UIP0 2472 aaKnown RBP8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 CENPVL3A0A0U1RRI6 287 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 IGHV3-11P01762 117 aa8.67□□□□□ -1.02
HMGCS1-202ENST00000433297 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 TRAV12-3A0A0B4J271 114 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 M0R1W7 72 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 UBE2E1P51965 193 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 LEPROTO15243 131 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 TIMM17AQ99595 171 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 FAM110AQ9BQ89 295 aa8.66□□□□□ -1.02
HMGCS1-202ENST00000433297 MUC4Q99102 2169 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 A0A0B4J2C4 111 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 LGALS9O00182 355 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 OVOL1O14753 267 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 P0DMU3 169 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 FAM231AP0DMU4 169 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 FAM231CP0DMU5 169 aa8.65□□□□□ -1.02
HMGCS1-202ENST00000433297 IGHV3OR16-10A0A075B7F0 116 aa8.65□□□□□ -1.03
HMGCS1-202ENST00000433297 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.03
HMGCS1-202ENST00000433297 TMEM223A0PJW6 202 aa8.65□□□□□ -1.03
HMGCS1-202ENST00000433297 M0R2P5 195 aa8.65□□□□□ -1.03
HMGCS1-202ENST00000433297 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.03
HMGCS1-202ENST00000433297 AKAP13Q12802 2813 aa8.65□□□□□ -1.03
HMGCS1-202ENST00000433297 TRAV8-3A0A0A6YYJ7 113 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 ZFP36P26651 326 aaKnown RBP8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 LINC00315P59091 139 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 ITLN2Q8WWU7 325 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 A0A0J9YXY3 114 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 H7C423 109 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 COX6CP09669 75 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 ZNF22P17026 224 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 COL6A6A6NMZ7 2263 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 A8MZ25 164 aa8.64□□□□□ -1.03
HMGCS1-202ENST00000433297 DEFB123Q8N688 67 aa8.63□□□□□ -1.03
HMGCS1-202ENST00000433297 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
HMGCS1-202ENST00000433297 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
HMGCS1-202ENST00000433297 HTN1P15515 57 aa8.63□□□□□ -1.03
HMGCS1-202ENST00000433297 SAA4P35542 130 aa8.63□□□□□ -1.03
HMGCS1-202ENST00000433297 TRAV12-2A0A075B6T6 113 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 A0A087WW49 117 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 EBI3Q14213 229 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 CEMP1Q6PRD7 247 aaPredicted RBP8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 DAND5Q8N907 189 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 U3KQE9 123 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 IGHV3-30-3P0DP02 117 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms