RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 DNAJC30Q96LL9 226 aa11.41□□□□□ -0.58
CNOT9-204ENST00000432877 C1orf43Q9BWL3 253 aa11.41□□□□□ -0.58
CNOT9-204ENST00000432877 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
CNOT9-204ENST00000432877 ARL2-SNX15V9GYD0 113 aa11.41□□□□□ -0.58
CNOT9-204ENST00000432877 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
CNOT9-204ENST00000432877 ATP6V0CP27449 155 aa11.4□□□□□ -0.58
CNOT9-204ENST00000432877 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
CNOT9-204ENST00000432877 HSD17B11Q8NBQ5 300 aa11.4□□□□□ -0.58
CNOT9-204ENST00000432877 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
CNOT9-204ENST00000432877 SFRP2Q96HF1 295 aa11.4□□□□□ -0.58
CNOT9-204ENST00000432877 NKX6-2Q9C056 277 aaPredicted RBP11.4□□□□□ -0.58
CNOT9-204ENST00000432877 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 KRBOX1C9JBD0 128 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 H3BVH4 76 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
CNOT9-204ENST00000432877 IFITM3Q01628 133 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 FAM74A4Q5TZK3 123 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 COX8CQ7Z4L0 72 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
CNOT9-204ENST00000432877 TRAV34A0A0B4J273 112 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 IFNA7P01567 189 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 UBE2D3P61077 147 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 UBE2D2P62837 147 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 HIST1H2BAQ96A08 127 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 ZFP30Q9Y2G7 519 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 UBR4Q5T4S7 5183 aa11.38□□□□□ -0.59
CNOT9-204ENST00000432877 TPT1P13693 172 aaKnown RBP11.37□□□□□ -0.59
CNOT9-204ENST00000432877 DEFA1P59665 94 aa11.37□□□□□ -0.59
CNOT9-204ENST00000432877 DEFA3P59666 94 aa11.37□□□□□ -0.59
CNOT9-204ENST00000432877 PKIAP61925 76 aa11.37□□□□□ -0.59
CNOT9-204ENST00000432877 OR10G8Q8NGN5 311 aa11.37□□□□□ -0.59
CNOT9-204ENST00000432877 A0A087WWL8 130 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 CRPP02741 224 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 CRIP1P50238 77 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 ZFP82Q8N141 532 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 AQP10Q96PS8 301 aa11.36□□□□□ -0.59
CNOT9-204ENST00000432877 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
CNOT9-204ENST00000432877 PEX7O00628 323 aa11.35□□□□□ -0.59
CNOT9-204ENST00000432877 Q86TA4 180 aa11.35□□□□□ -0.59
CNOT9-204ENST00000432877 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-204ENST00000432877 M0R036 132 aa11.34□□□□□ -0.59
CNOT9-204ENST00000432877 GRIFINA4D1Z8 144 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 M0R381 172 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 SH2D1AO60880 128 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 RAB4BP61018 213 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 MIAQ16674 131 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 ZNF674Q2M3X9 581 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 LINC01559Q495D7 138 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 C15orf54Q8N8G6 183 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 C9orf163Q8N9P6 203 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 DAZAP1Q96EP5 407 aaKnown RBP11.33□□□□□ -0.6
CNOT9-204ENST00000432877 ZC2HC1AQ96GY0 325 aa11.33□□□□□ -0.6
CNOT9-204ENST00000432877 CTXND1A0A1B0GTU2 59 aa11.32□□□□□ -0.6
CNOT9-204ENST00000432877 TMEM97Q5BJF2 176 aa11.32□□□□□ -0.6
CNOT9-204ENST00000432877 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
CNOT9-204ENST00000432877 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
CNOT9-204ENST00000432877 FAM74A7A6NL05 159 aa11.31□□□□□ -0.6
CNOT9-204ENST00000432877 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
CNOT9-204ENST00000432877 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
CNOT9-204ENST00000432877 Q6ZRU5 148 aa11.31□□□□□ -0.6
CNOT9-204ENST00000432877 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
CNOT9-204ENST00000432877 PRSS1P07477 247 aa11.3□□□□□ -0.6
CNOT9-204ENST00000432877 UBE2G2P60604 165 aa11.3□□□□□ -0.6
CNOT9-204ENST00000432877 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
CNOT9-204ENST00000432877 CLRN3Q8NCR9 226 aa11.3□□□□□ -0.6
CNOT9-204ENST00000432877 PKHD1L1Q86WI1 4243 aa11.29□□□□□ -0.6
CNOT9-204ENST00000432877 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
CNOT9-204ENST00000432877 A0A0D9SG52 128 aa11.29□□□□□ -0.6
CNOT9-204ENST00000432877 HNRNPA3P51991 378 aaKnown RBP11.29□□□□□ -0.6
CNOT9-204ENST00000432877 UBE2G1P62253 170 aa11.29□□□□□ -0.6
CNOT9-204ENST00000432877 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
CNOT9-204ENST00000432877 CHCHD5Q9BSY4 110 aa11.29□□□□□ -0.6
CNOT9-204ENST00000432877 A6NHS1 94 aa11.28□□□□□ -0.6
CNOT9-204ENST00000432877 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
CNOT9-204ENST00000432877 ZNF726P1Q15940 193 aa11.28□□□□□ -0.6
CNOT9-204ENST00000432877 INO80EQ8NBZ0 244 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-204ENST00000432877 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
CNOT9-204ENST00000432877 PRR34Q9NV39 138 aa11.28□□□□□ -0.6
CNOT9-204ENST00000432877 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.61
CNOT9-204ENST00000432877 PTTG1O95997 202 aa11.27□□□□□ -0.61
CNOT9-204ENST00000432877 LTAP01374 205 aa11.27□□□□□ -0.61
CNOT9-204ENST00000432877 FHITP49789 147 aa11.27□□□□□ -0.61
CNOT9-204ENST00000432877 SDIM1Q6ZPB5 146 aa11.27□□□□□ -0.61
CNOT9-204ENST00000432877 CXCL1P09341 107 aa11.26□□□□□ -0.61
CNOT9-204ENST00000432877 RPL7L1Q6DKI1 246 aaKnown RBP11.26□□□□□ -0.61
CNOT9-204ENST00000432877 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
CNOT9-204ENST00000432877 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
CNOT9-204ENST00000432877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.26□□□□□ -0.61
CNOT9-204ENST00000432877 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
CNOT9-204ENST00000432877 ZNF56Q15929 161 aa11.25□□□□□ -0.61
CNOT9-204ENST00000432877 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
CNOT9-204ENST00000432877 ALG5Q9Y673 324 aa11.25□□□□□ -0.61
CNOT9-204ENST00000432877 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
CNOT9-204ENST00000432877 CIRBPQ14011 172 aaKnown RBP11.24□□□□□ -0.61
CNOT9-204ENST00000432877 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms