RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PRR4Q16378 134 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 HS3ST6Q96QI5 342 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 SPRR3Q9UBC9 169 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 TMEM14DPA8MWL7 114 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 UBE2D3P61077 147 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 UBE2D2P62837 147 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 MRPL51Q4U2R6 128 aaKnown RBP4□□□□□ -1.77
PTPN4-203ENST00000430976 LINC00337Q8N6G1 96 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 DIRC1Q969H9 104 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 PRR15LQ9BU68 103 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 DDX60Q8IY21 1712 aaKnown RBP3.99□□□□□ -1.77
PTPN4-203ENST00000430976 ZFHX2Q9C0A1 2572 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-203ENST00000430976 BPTFQ12830 3046 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 H7BZZ5 65 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 M0R1W7 72 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 MIFP14174 115 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 SPINK2P20155 84 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 HAMPP81172 84 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 MRPL35Q9NZE8 188 aaKnown RBP3.99□□□□□ -1.77
PTPN4-203ENST00000430976 SIPA1L3O60292 1781 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-203ENST00000430976 LY6HO94772 140 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
PTPN4-203ENST00000430976 PTPRQQ9UMZ3 2332 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 C19orf71A6NCJ1 209 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 IGHV4-31P0DP07 118 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 ENHOQ6UWT2 76 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 Q75L30 129 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 COL6A6A6NMZ7 2263 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 PRRC2AP48634 2157 aaKnown RBP3.98□□□□□ -1.77
PTPN4-203ENST00000430976 PIGYQ3MUY2 71 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 KIAA1671Q9BY89 1806 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 DSCAMO60469 2012 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 USF3Q68DE3 2245 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 SMIM27A0A1W2PRY6 76 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 IFI6P09912 130 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 FOLR3P41439 243 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 CMC4P56277 68 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-203ENST00000430976 HIGD2BQ4VC39 106 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 CACNA1EQ15878 2313 aa3.98□□□□□ -1.77
PTPN4-203ENST00000430976 BRCA2P51587 3418 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 IGKV6-21A0A0C4DH24 114 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 GNRH2O43555 120 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 Q8N2B8 174 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 RP1L1Q8IWN7 2480 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-203ENST00000430976 C9JCJ5 164 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 FAM229BQ4G0N7 80 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 ZNF580Q9UK33 172 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 IGKV6D-41A0A0C4DH26 115 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 E7EUB6 86 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 H7C423 109 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 LYPD5Q6UWN5 251 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 ZNRF1Q8ND25 227 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 CTSZQ9UBR2 303 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 TIMM9Q9Y5J7 89 aa3.97□□□□□ -1.77
PTPN4-203ENST00000430976 TRAV7A0A075B6U4 112 aa3.96□□□□□ -1.77
PTPN4-203ENST00000430976 ZNF32P17041 273 aa3.96□□□□□ -1.77
PTPN4-203ENST00000430976 Q6ZPA2 131 aa3.96□□□□□ -1.77
PTPN4-203ENST00000430976 IGKV1D-17A0A075B6S4 117 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 SOCS3O14543 225 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 MED14OSP0DP75 135 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 COX7A1P24310 79 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 RPL34P49207 117 aaKnown RBP3.96□□□□□ -1.78
PTPN4-203ENST00000430976 TMEM167BQ9NRX6 74 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 TRBV7-3A0A075B6L6 115 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 A0A1B0GUT8 65 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 SDHAF1A6NFY7 115 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 KLHL30-AS1Q8NEE0 82 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 SMCR5Q8TEV8 140 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 UBL5Q9BZL1 73 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 CNOT1A5YKK6 2376 aaKnown RBP3.96□□□□□ -1.78
PTPN4-203ENST00000430976 ZNF462Q96JM2 2506 aa3.96□□□□□ -1.78
PTPN4-203ENST00000430976 IGKV6D-21A0A0A0MT36 114 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 NOVP48745 357 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 MSMPQ1L6U9 139 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 SPANXN1Q5VSR9 72 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 CASC2Q6XLA1 102 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 COL11A2P13942 1736 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 OTOGLQ3ZCN5 2332 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 XIRP2A4UGR9 3374 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 SYCNQ0VAF6 134 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 DEFB134Q4QY38 66 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 DEFB104AQ8WTQ1 72 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 IGHV1-3A0A0C4DH29 117 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 C1orf134Q5TEV5 83 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 RPP21Q9H633 154 aaKnown RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 SPTAN1Q13813 2472 aaKnown RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 NTN3O00634 580 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 IGHV1-2P23083 117 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 PLNP26678 52 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 TJP1Q07157 1748 aa3.95□□□□□ -1.78
PTPN4-203ENST00000430976 SP5Q6BEB4 398 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-203ENST00000430976 ZSWIM8A7E2V4 1837 aa3.94□□□□□ -1.78
PTPN4-203ENST00000430976 ANK1P16157 1881 aa3.94□□□□□ -1.78
PTPN4-203ENST00000430976 IGHV3-9P01782 118 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms