RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 MGAM2Q2M2H8 2515 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 D6R8Y8 96 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 CKS2P33552 79 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 Q0VG73 95 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
HMGB3P4-201ENST00000428776 CRYGDP07320 174 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 MIFP14174 115 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 LINC00315P59091 139 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 C18orf32Q8TCD1 76 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 PRELID3AQ96N28 172 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 LAMTOR2Q9Y2Q5 125 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 CMYA5Q8N3K9 4069 aa9.13□□□□□ -0.95
HMGB3P4-201ENST00000428776 A0A087WWL8 130 aa9.12□□□□□ -0.95
HMGB3P4-201ENST00000428776 TRGV1A0A0A0MS02 117 aa9.12□□□□□ -0.95
HMGB3P4-201ENST00000428776 MGPP08493 103 aa9.12□□□□□ -0.95
HMGB3P4-201ENST00000428776 COA6Q5JTJ3 125 aaKnown RBP9.12□□□□□ -0.95
HMGB3P4-201ENST00000428776 SAMD10Q9BYL1 202 aa9.12□□□□□ -0.95
HMGB3P4-201ENST00000428776 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 F5H697 171 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 SMKR1H3BMG3 65 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 K7EIL1 84 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 RHODO00212 210 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 RS1O15537 224 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 PPP1R17O96001 155 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 SNRPEP62304 92 aaKnown RBP9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 FAM74A4Q5TZK3 123 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 CFAP126Q5VTH2 177 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 Q6ZTI0 123 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 BAGE3Q86Y29 109 aa9.11□□□□□ -0.95
HMGB3P4-201ENST00000428776 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
HMGB3P4-201ENST00000428776 NCR2O95944 276 aa9.1□□□□□ -0.95
HMGB3P4-201ENST00000428776 PRB2P02812 416 aaPredicted RBP9.1□□□□□ -0.95
HMGB3P4-201ENST00000428776 ZNF56Q15929 161 aa9.1□□□□□ -0.95
HMGB3P4-201ENST00000428776 UFSP1Q6NVU6 142 aa9.1□□□□□ -0.95
HMGB3P4-201ENST00000428776 ZFP2Q6ZN57 461 aa9.1□□□□□ -0.95
HMGB3P4-201ENST00000428776 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 CIDEAO60543 219 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 NPYP01303 97 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 HOXA5P20719 270 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 EMP1P54849 157 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 Q8NAQ8 132 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 OR4C5Q8NGB2 326 aa9.09□□□□□ -0.95
HMGB3P4-201ENST00000428776 GAGE12BA1L429 117 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 H7C1H1 209 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 GAGE7O76087 117 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 GAS8-AS1O95177 125 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 GATA1P15976 413 aaPredicted RBP9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 IQCJQ1A5X6 159 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 SUMO4Q6EEV6 95 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 LINC00612Q8N6U2 182 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 NRACQ8N912 160 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 EDA2RQ9HAV5 297 aa9.08□□□□□ -0.96
HMGB3P4-201ENST00000428776 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 M0QY20 66 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 SERF1AO75920 110 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 ESDP10768 282 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 NIT1Q86X76 327 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 PRSS3P2Q8NHM4 247 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 C18orf15Q96N68 181 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
HMGB3P4-201ENST00000428776 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
HMGB3P4-201ENST00000428776 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
HMGB3P4-201ENST00000428776 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
HMGB3P4-201ENST00000428776 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
HMGB3P4-201ENST00000428776 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
HMGB3P4-201ENST00000428776 DNAH3Q8TD57 4116 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 IGHV3-73A0A0B4J1V6 119 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 LINC00614P0C842 121 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 PMCHP20382 165 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 LINC00310P59036 64 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 HIST3H2BBQ8N257 126 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 RPL39LQ96EH5 51 aaKnown RBP9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 ZNF479Q96JC4 524 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 RETNQ9HD89 108 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 NXT2Q9NPJ8 142 aaKnown RBP9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 NIT2Q9NQR4 276 aa9.05□□□□□ -0.96
HMGB3P4-201ENST00000428776 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 DEFB4AO15263 64 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 NUPR1O60356 82 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms