RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 C20orf173Q96LM9 149 aa11.52□□□□□ -0.56
SCAP-206ENST00000428413 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
SCAP-206ENST00000428413 ITPR3Q14573 2671 aa11.52□□□□□ -0.57
SCAP-206ENST00000428413 PSMB2P49721 201 aa11.52□□□□□ -0.57
SCAP-206ENST00000428413 PRR9Q5T870 116 aa11.52□□□□□ -0.57
SCAP-206ENST00000428413 DYNLRB2Q8TF09 96 aa11.52□□□□□ -0.57
SCAP-206ENST00000428413 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 UBE2E2Q96LR5 201 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 C1QTNF4Q9BXJ3 329 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 MSMBP08118 114 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 HIST2H2BCQ6DN03 193 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 CHAC1Q9BUX1 264 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 FXYD2P54710 66 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 KIR2DL4Q99706 377 aa11.51□□□□□ -0.57
SCAP-206ENST00000428413 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
SCAP-206ENST00000428413 RPL39P62891 51 aaKnown RBP11.5□□□□□ -0.57
SCAP-206ENST00000428413 DGAT2L7PQ6IED9 249 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 ATP5LO75964 103 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
SCAP-206ENST00000428413 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
SCAP-206ENST00000428413 PGPEP1Q9NXJ5 209 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 IGHV3-38A0A0C4DH36 116 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 C2orf66Q6UXQ4 117 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 ERG28Q9UKR5 140 aa11.5□□□□□ -0.57
SCAP-206ENST00000428413 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
SCAP-206ENST00000428413 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
SCAP-206ENST00000428413 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
SCAP-206ENST00000428413 SNRPD3P62318 126 aaKnown RBP11.49□□□□□ -0.57
SCAP-206ENST00000428413 COL27A1Q8IZC6 1860 aaPredicted RBP11.49□□□□□ -0.57
SCAP-206ENST00000428413 COX6B1P14854 86 aa11.49□□□□□ -0.57
SCAP-206ENST00000428413 SUMO2P61956 95 aaKnown RBP11.49□□□□□ -0.57
SCAP-206ENST00000428413 C11orf71Q6IPW1 123 aa11.49□□□□□ -0.57
SCAP-206ENST00000428413 YAE1D1Q9NRH1 226 aa11.49□□□□□ -0.57
SCAP-206ENST00000428413 AVPP01185 164 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE12JA6NER3 117 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE7O76087 117 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE12FP0CL80 117 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE12GP0CL81 117 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE12IP0CL82 117 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE4Q13068 117 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE2BQ13066 116 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 ZNF876PQ49A33 203 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE2EQ4V326 116 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 DAZ1Q9NQZ3 744 aaKnown RBP11.48□□□□□ -0.57
SCAP-206ENST00000428413 GAGE2DQ9UEU5 116 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 CSMD2Q7Z408 3487 aa11.48□□□□□ -0.57
SCAP-206ENST00000428413 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
SCAP-206ENST00000428413 TSPAN13O95857 204 aa11.47□□□□□ -0.57
SCAP-206ENST00000428413 SLC25A16P16260 332 aa11.47□□□□□ -0.57
SCAP-206ENST00000428413 DEFB131AP59861 70 aa11.47□□□□□ -0.57
SCAP-206ENST00000428413 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
SCAP-206ENST00000428413 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
SCAP-206ENST00000428413 ZFAND3Q9H8U3 227 aa11.47□□□□□ -0.57
SCAP-206ENST00000428413 SNCGO76070 127 aa11.46□□□□□ -0.57
SCAP-206ENST00000428413 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.57
SCAP-206ENST00000428413 DPH3P1Q9H4G8 78 aa11.46□□□□□ -0.57
SCAP-206ENST00000428413 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.58
SCAP-206ENST00000428413 ODF1Q14990 250 aa11.46□□□□□ -0.58
SCAP-206ENST00000428413 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.58
SCAP-206ENST00000428413 USP24Q9UPU5 2620 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 A0A096LNJ9 63 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 B4DSR2 109 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 IGHG4P01861 327 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 FBXL19-AS1Q494R0 122 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 Q6ZUT4 128 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 RAX2Q96IS3 184 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 LINC01587Q99440 93 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 Q8N8P6 123 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 MDFICQ9P1T7 246 aa11.45□□□□□ -0.58
SCAP-206ENST00000428413 HELZ2Q9BYK8 2649 aaKnown RBP11.44□□□□□ -0.58
SCAP-206ENST00000428413 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 RNF185Q96GF1 192 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 SPXQ9BT56 116 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 SMIM2Q9BVW6 85 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 FOXI1Q12951 378 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 APRG1Q8IVJ8 170 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 XCL2Q9UBD3 114 aa11.44□□□□□ -0.58
SCAP-206ENST00000428413 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
SCAP-206ENST00000428413 OVOL1O14753 267 aa11.43□□□□□ -0.58
SCAP-206ENST00000428413 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
SCAP-206ENST00000428413 IGLL5B9A064 214 aa11.43□□□□□ -0.58
SCAP-206ENST00000428413 CFHR3Q02985 330 aa11.43□□□□□ -0.58
SCAP-206ENST00000428413 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
SCAP-206ENST00000428413 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 P0DMU3 169 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms