RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 Q6ZTI0 123 aa8.66□□□□□ -1.02
RFC4-206ENST00000427785 Q6ZWC4 215 aa8.66□□□□□ -1.02
RFC4-206ENST00000427785 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
RFC4-206ENST00000427785 SMIM17P0DL12 118 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 RAB4AP20338 218 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 ZNF56Q15929 161 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 IQCJQ1A5X6 159 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 Q8NAQ8 132 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 OVOL2Q9BRP0 275 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
RFC4-206ENST00000427785 IGHV3-73A0A0B4J1V6 119 aa8.64□□□□□ -1.03
RFC4-206ENST00000427785 SMIM9A6NGZ8 99 aa8.64□□□□□ -1.03
RFC4-206ENST00000427785 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
RFC4-206ENST00000427785 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
RFC4-206ENST00000427785 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
RFC4-206ENST00000427785 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
RFC4-206ENST00000427785 PTH2Q96A98 100 aa8.64□□□□□ -1.03
RFC4-206ENST00000427785 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 GAGE12BA1L429 117 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 GAGE7O76087 117 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 NPYP01303 97 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 CRYGDP07320 174 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 CKS2P33552 79 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 LINC00315P59091 139 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 SBSPONQ8IVN8 264 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 MRAPQ8TCY5 172 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
RFC4-206ENST00000427785 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
RFC4-206ENST00000427785 A8MWV9 139 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 F5H697 171 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 RS1O15537 224 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 MIFP14174 115 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 NDUFA6P56556 154 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 SUMO4Q6EEV6 95 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 C18orf32Q8TCD1 76 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 RASL10AQ92737 203 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 CELA1Q9UNI1 258 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 TP53TG1Q9Y2A0 90 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 U3KQK5 164 aa8.62□□□□□ -1.03
RFC4-206ENST00000427785 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
RFC4-206ENST00000427785 FAM222AQ5U5X8 452 aa8.61□□□□□ -1.03
RFC4-206ENST00000427785 UFSP1Q6NVU6 142 aa8.61□□□□□ -1.03
RFC4-206ENST00000427785 RPL39LQ96EH5 51 aaKnown RBP8.61□□□□□ -1.03
RFC4-206ENST00000427785 MRAP2Q96G30 205 aa8.61□□□□□ -1.03
RFC4-206ENST00000427785 TRGV2A0A075B6R0 118 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 RHODO00212 210 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 ZNF479Q96JC4 524 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
RFC4-206ENST00000427785 TENM3Q9P273 2699 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 PPBPP02775 128 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 S100A6P06703 90 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 LINC00612Q8N6U2 182 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 NRACQ8N912 160 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 SPATA25Q9BR10 227 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 DKK2Q9UBU2 259 aa8.59□□□□□ -1.03
RFC4-206ENST00000427785 LOC389332A0A1B0GUA5 103 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 SERF1AO75920 110 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 P0DMU3 169 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 LINC00310P59036 64 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 Q6ZSN1 163 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 TM2D3Q9BRN9 247 aa8.58□□□□□ -1.04
RFC4-206ENST00000427785 SNRPEP62304 92 aaKnown RBP8.57□□□□□ -1.04
RFC4-206ENST00000427785 Q0VG73 95 aa8.57□□□□□ -1.04
RFC4-206ENST00000427785 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
RFC4-206ENST00000427785 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
RFC4-206ENST00000427785 MAP1LC3AQ9H492 121 aa8.57□□□□□ -1.04
RFC4-206ENST00000427785 A0A0J9YWU9 116 aa8.56□□□□□ -1.04
RFC4-206ENST00000427785 M0QY20 66 aa8.56□□□□□ -1.04
RFC4-206ENST00000427785 DAD1P61803 113 aa8.56□□□□□ -1.04
RFC4-206ENST00000427785 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
RFC4-206ENST00000427785 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
RFC4-206ENST00000427785 C11orf68Q9H3H3 251 aaKnown RBP8.56□□□□□ -1.04
RFC4-206ENST00000427785 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
RFC4-206ENST00000427785 K7EQD1 137 aa8.55□□□□□ -1.04
RFC4-206ENST00000427785 NUPR1O60356 82 aa8.55□□□□□ -1.04
RFC4-206ENST00000427785 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
RFC4-206ENST00000427785 IFI27P40305 119 aaPredicted RBP8.55□□□□□ -1.04
RFC4-206ENST00000427785 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
RFC4-206ENST00000427785 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
RFC4-206ENST00000427785 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
RFC4-206ENST00000427785 HUWE1Q7Z6Z7 4374 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms