RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KLF5Q13887 457 aaPredicted RBP8.23□□□□□ -1.09
TCOF1-204ENST00000427724 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 TRBV19A0A075B6N1 114 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 INSL3P51460 131 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 TTTY13Q9BZ97 58 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 CHTOPQ9Y3Y2 248 aaKnown RBP8.23□□□□□ -1.09
TCOF1-204ENST00000427724 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 GAGE2EQ4V326 116 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 GAGE2DQ9UEU5 116 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 TRAV26-1A0A087WT03 109 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 CGB3P0DN86 165 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 CGB7P0DN87 165 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 ZNF876PQ49A33 203 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 CT83Q5H943 113 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 SPATA12Q7Z6I5 190 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 GFRA4Q9GZZ7 299 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 DKK2Q9UBU2 259 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 ADAMTS20P59510 1910 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 IGKV3D-20A0A0C4DH25 116 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 A8MWV9 139 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 WFDC2Q14508 124 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 NPBQ8NG41 125 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 ZNF815PA8K554 130 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 TMEM61Q8N0U2 210 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 ZNF48Q96MX3 618 aaPredicted RBP8.22□□□□□ -1.09
TCOF1-204ENST00000427724 ANXA2RQ3ZCQ2 193 aa8.22□□□□□ -1.09
TCOF1-204ENST00000427724 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.09
TCOF1-204ENST00000427724 SIGLEC8Q9NYZ4 499 aa8.21□□□□□ -1.1
TCOF1-204ENST00000427724 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.1
TCOF1-204ENST00000427724 IGLV2-8P01709 118 aa8.21□□□□□ -1.1
TCOF1-204ENST00000427724 F8W1H4 67 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 LTAP01374 205 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 LGALS3P17931 250 aaKnown RBP8.2□□□□□ -1.1
TCOF1-204ENST00000427724 LYPD1Q8N2G4 141 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 ZNF491Q8N8L2 437 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 PHLDA1Q8WV24 401 aaPredicted RBP8.2□□□□□ -1.1
TCOF1-204ENST00000427724 C4orf3Q8WVX3 66 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 HLA-DMBP28068 263 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 GTSF1Q8WW33 167 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 IGLL5B9A064 214 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 GAGE4Q13068 117 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 GAGE5Q13069 117 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 LGALS9BQ3B8N2 356 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 GDF5OSQ5U4N7 250 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 LGALS9CQ6DKI2 356 aa8.2□□□□□ -1.1
TCOF1-204ENST00000427724 A0A087WWL8 130 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 CRYBA4P53673 196 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 FXYD2P54710 66 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 KLK5Q9Y337 293 aaPredicted RBP8.19□□□□□ -1.1
TCOF1-204ENST00000427724 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 Q8N976 141 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 B5MCH6 92 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 COX6CP09669 75 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 LINC00482Q8N8I6 264 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 FAM110AQ9BQ89 295 aa8.19□□□□□ -1.1
TCOF1-204ENST00000427724 NOP10Q9NPE3 64 aaKnown RBP8.19□□□□□ -1.1
TCOF1-204ENST00000427724 ZFHX4Q86UP3 3567 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 PPP1R17O96001 155 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 FAM104BQ5XKR9 115 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 CFAP161Q6P656 301 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 TSPAN13O95857 204 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 IGKV1D-37A0A075B6S9 117 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 PAX4O43316 350 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 PDE6HQ13956 83 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 LINC00322Q6ZN03 302 aaPredicted RBP8.18□□□□□ -1.1
TCOF1-204ENST00000427724 AKAP13Q12802 2813 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 ATMQ13315 3056 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 ZZEF1O43149 2961 aa8.18□□□□□ -1.1
TCOF1-204ENST00000427724 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 H3BRN7 92 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 IGHG4P01861 327 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
TCOF1-204ENST00000427724 TMEM14CQ9P0S9 112 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 PTPRBP23467 1997 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 ADARB2-AS1A8MUL3 147 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 MRPL51Q4U2R6 128 aaKnown RBP8.17□□□□□ -1.1
TCOF1-204ENST00000427724 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 NPYP01303 97 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 Q9HAA7 133 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 CTSGP08311 255 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 VCX2Q9H322 139 aa8.17□□□□□ -1.1
TCOF1-204ENST00000427724 IGLV11-55A0A075B6I3 123 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 K7EIM0 57 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 CCL18P55774 89 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 IL17DQ8TAD2 202 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 Q6ZS46 218 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 CEND1Q8N111 149 aa8.16□□□□□ -1.1
TCOF1-204ENST00000427724 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
TCOF1-204ENST00000427724 SRSF1Q07955 248 aaKnown RBP eCLIP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms