RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 PRR27Q6MZM9 219 aa6.28□□□□□ -1.4
RFX3-AS1-202ENST00000427722 BAGE2Q86Y30 109 aa6.28□□□□□ -1.4
RFX3-AS1-202ENST00000427722 SAMD10Q9BYL1 202 aa6.28□□□□□ -1.4
RFX3-AS1-202ENST00000427722 JPT2Q9H910 190 aa6.28□□□□□ -1.4
RFX3-AS1-202ENST00000427722 PHLDA3Q9Y5J5 127 aa6.28□□□□□ -1.4
RFX3-AS1-202ENST00000427722 LY96Q9Y6Y9 160 aa6.28□□□□□ -1.4
RFX3-AS1-202ENST00000427722 A0A087WWL8 130 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 RHODO00212 210 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 BTF3P20290 206 aaKnown RBP6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 RPL35P42766 123 aaKnown RBP6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GAGE1Q13065 139 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GAGE4Q13068 117 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GAGE5Q13069 117 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 PIK3CD-AS1Q5SR53 167 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 DNLZQ5SXM8 178 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 ZFP2Q6ZN57 461 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 Q6ZSN1 163 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SLC51BQ86UW2 128 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 C9orf62Q8N4C0 152 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 C11orf52Q96A22 123 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 DERL1Q9BUN8 251 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SCRT2Q9NQ03 307 aa6.27□□□□□ -1.41
RFX3-AS1-202ENST00000427722 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 TRAV9-2A0A087WT02 112 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 CRYGDP07320 174 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 EVI2AP22794 236 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 TIRAPP58753 221 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 CENPWQ5EE01 88 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 OR10J3Q5JRS4 329 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 UFSP1Q6NVU6 142 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 ZFP82Q8N141 532 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 TNFRSF18Q9Y5U5 241 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 HERC2O95714 4834 aa6.26□□□□□ -1.41
RFX3-AS1-202ENST00000427722 TRAV8-6A0A0B4J262 113 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 IGHV3-38A0A0C4DH36 116 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 IFNA1P01562 189 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 LINC00694P0DN24 101 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 BCL2P10415 239 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 MEF2BQ02080 365 aaPredicted RBP6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SPATA12Q7Z6I5 190 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 C14orf178Q8N769 122 aaPredicted RBP6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 OR10AG1Q8NH19 301 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 MLST8Q9BVC4 326 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GTSF1LQ9H1H1 148 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 MSRB1Q9NZV6 116 aa6.25□□□□□ -1.41
RFX3-AS1-202ENST00000427722 MUC21A0A0G2JKD1 596 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 MUC21A0A140T8X8 626 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 NKX2-5P52952 324 aaPredicted RBP6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 LELP1Q5T871 98 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 C10orf126Q8N4M7 172 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SFRP2Q96HF1 295 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 Q9UF83 564 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
RFX3-AS1-202ENST00000427722 RAB19A4D1S5 217 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 K7EP13 123 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 PDE6DO43924 150 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 IGHV3-33P01772 117 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 CXCL1P09341 107 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 IGHV3-30-3P0DP02 117 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 GNG4P50150 75 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 LINC01556Q5JQF7 62 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 ALKAL2Q6UX46 152 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 MED9Q9NWA0 146 aa6.23□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SNAI2O43623 268 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SSTP61278 116 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 ZNF56Q15929 161 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 SPANXN1Q5VSR9 72 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 OR2D3Q8NGH3 330 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 TPPP3Q9BW30 176 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 Q9HAA7 133 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 VAX2Q9UIW0 290 aa6.22□□□□□ -1.41
RFX3-AS1-202ENST00000427722 TRBV20OR9-2A0A075B6H5 130 aa6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 IGLV2-8P01709 118 aa6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 GZMBP10144 247 aa6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 TAGLN2P37802 199 aaKnown RBP6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 FER1L6-AS1Q8NA97 138 aa6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 DAZAP1Q96EP5 407 aaKnown RBP6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 SMIM12Q96EX1 92 aa6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 AP1S3Q96PC3 154 aa6.21□□□□□ -1.42
RFX3-AS1-202ENST00000427722 A0A087WTM6 91 aa6.2□□□□□ -1.42
RFX3-AS1-202ENST00000427722 TRBV10-1A0A0K0K1A3 114 aa6.2□□□□□ -1.42
RFX3-AS1-202ENST00000427722 RBFOX3A6NFN3 312 aa6.2□□□□□ -1.42
RFX3-AS1-202ENST00000427722 PSCAO43653 123 aa6.2□□□□□ -1.42
RFX3-AS1-202ENST00000427722 P01737 135 aa6.2□□□□□ -1.42
RFX3-AS1-202ENST00000427722 RPL36AP83881 106 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms