RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 MED9Q9NWA0 146 aa9.89□□□□□ -0.83
NCKIPSD-205ENST00000426678 VAX2Q9UIW0 290 aa9.89□□□□□ -0.83
NCKIPSD-205ENST00000426678 IGHV3-38A0A0C4DH36 116 aa9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 CRYGDP07320 174 aa9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 LELP1Q5T871 98 aa9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 ALKAL2Q6UX46 152 aa9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 DAZAP1Q96EP5 407 aaKnown RBP9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 MSRB1Q9NZV6 116 aa9.88□□□□□ -0.83
NCKIPSD-205ENST00000426678 PKD1P98161 4303 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 HERC2O95714 4834 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 PKHD1P08F94 4074 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 RAB19A4D1S5 217 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 C16orf90A8MZG2 172 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 BLOC1S1P78537 153 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 OR10AG1Q8NH19 301 aa9.87□□□□□ -0.83
NCKIPSD-205ENST00000426678 SNAI2O43623 268 aa9.86□□□□□ -0.83
NCKIPSD-205ENST00000426678 OR5AL1P0C617 328 aa9.86□□□□□ -0.83
NCKIPSD-205ENST00000426678 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
NCKIPSD-205ENST00000426678 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
NCKIPSD-205ENST00000426678 TNFRSF18Q9Y5U5 241 aa9.86□□□□□ -0.83
NCKIPSD-205ENST00000426678 DNAH11Q96DT5 4516 aa9.86□□□□□ -0.83
NCKIPSD-205ENST00000426678 A0A1B0GVG6 124 aa9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 IGLV2-8P01709 118 aa9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 RPS20P60866 119 aaKnown RBP9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 SPATA12Q7Z6I5 190 aa9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 OR2D3Q8NGH3 330 aa9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 SSBP4Q9BWG4 385 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
NCKIPSD-205ENST00000426678 MUC21A0A0G2JKD1 596 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 TRBV10-1A0A0K0K1A3 114 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 MUC21A0A140T8X8 626 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 EREGO14944 169 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 P01737 135 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 NKX2-5P52952 324 aaPredicted RBP9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 ERVFC1-1P60608 527 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 ZNF56Q15929 161 aa9.84□□□□□ -0.83
NCKIPSD-205ENST00000426678 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 A0A087WWC5 75 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 XKRY2A2RUG3 117 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 C19orf71A6NCJ1 209 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 SMIM17P0DL12 118 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 SSTP61278 116 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 RPL36AP83881 106 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 FER1L6-AS1Q8NA97 138 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 RPL36ALQ969Q0 106 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 AP1S3Q96PC3 154 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 TPPP3Q9BW30 176 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 Q9UF83 564 aa9.83□□□□□ -0.84
NCKIPSD-205ENST00000426678 GZMBP10144 247 aa9.82□□□□□ -0.84
NCKIPSD-205ENST00000426678 RAB4BP61018 213 aa9.82□□□□□ -0.84
NCKIPSD-205ENST00000426678 RBFOX3A6NFN3 312 aa9.81□□□□□ -0.84
NCKIPSD-205ENST00000426678 F5H697 171 aa9.81□□□□□ -0.84
NCKIPSD-205ENST00000426678 IGLC6P0CF74 106 aa9.81□□□□□ -0.84
NCKIPSD-205ENST00000426678 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 IBA57-AS1B1ANH7 110 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 TMEM250H0YL14 139 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 PSCAO43653 123 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 CACNG7P62955 275 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 Q9HAA7 133 aa9.8□□□□□ -0.84
NCKIPSD-205ENST00000426678 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.79□□□□□ -0.84
NCKIPSD-205ENST00000426678 OR10G8Q8NGN5 311 aa9.79□□□□□ -0.84
NCKIPSD-205ENST00000426678 LYPD6BQ8NI32 183 aa9.79□□□□□ -0.84
NCKIPSD-205ENST00000426678 URGCP-MRPS24S4R325 110 aa9.79□□□□□ -0.84
NCKIPSD-205ENST00000426678 A0A087WTM6 91 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 F2Z2F3 143 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 CEBPGP53567 150 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 UBE2D3P61077 147 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 UBE2D2P62837 147 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 LAGE3Q14657 143 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 TOR2AQ5JU69 321 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 NUDT11Q96G61 164 aa9.78□□□□□ -0.84
NCKIPSD-205ENST00000426678 MGPP08493 103 aa9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 KCNIP4Q6PIL6 250 aa9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 Q8N3U1 123 aa9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 OCC1Q8TAD7 63 aa9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 EIF5A2Q9GZV4 153 aaKnown RBP9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 RPP21Q9H633 154 aaKnown RBP9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 RYR1P21817 5038 aa9.77□□□□□ -0.85
NCKIPSD-205ENST00000426678 K7EN84 100 aa9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 RNASE7Q9H1E1 156 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 KIF25-AS1Q9Y6Z4 181 aa9.76□□□□□ -0.85
NCKIPSD-205ENST00000426678 TRAV8-3A0A0A6YYJ7 113 aa9.75□□□□□ -0.85
NCKIPSD-205ENST00000426678 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms