RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 CHCHD5Q9BSY4 110 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 IGKV1D-37A0A075B6S9 117 aa12.32□□□□□ -0.44
PKP4-205ENST00000426248 ATP6V0E1O15342 81 aa12.32□□□□□ -0.44
PKP4-205ENST00000426248 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
PKP4-205ENST00000426248 CRLF1O75462 422 aa12.32□□□□□ -0.44
PKP4-205ENST00000426248 IGLV2-23P01705 113 aa12.32□□□□□ -0.44
PKP4-205ENST00000426248 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
PKP4-205ENST00000426248 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
PKP4-205ENST00000426248 WFDC11Q8NEX6 87 aa12.32□□□□□ -0.44
PKP4-205ENST00000426248 SMG1Q96Q15 3661 aaKnown RBP12.32□□□□□ -0.44
PKP4-205ENST00000426248 C9orf153Q5TBE3 101 aa12.31□□□□□ -0.44
PKP4-205ENST00000426248 H7C1H1 209 aa12.31□□□□□ -0.44
PKP4-205ENST00000426248 C15orf32Q32M92 178 aa12.31□□□□□ -0.44
PKP4-205ENST00000426248 RHODO00212 210 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 RPL13AP40429 203 aaKnown RBP12.3□□□□□ -0.44
PKP4-205ENST00000426248 PRSS2P07478 247 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 DEFB112Q30KQ8 113 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 C16orf92Q96LL3 132 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 IGHV4-59P01825 116 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 CRIP1P50238 77 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
PKP4-205ENST00000426248 TRAV41A0A0B4J266 112 aa12.29□□□□□ -0.44
PKP4-205ENST00000426248 EGR2P11161 476 aaPredicted RBP12.29□□□□□ -0.44
PKP4-205ENST00000426248 TRGV9Q99603 122 aa12.29□□□□□ -0.44
PKP4-205ENST00000426248 TNFRSF18Q9Y5U5 241 aa12.29□□□□□ -0.44
PKP4-205ENST00000426248 PAX8Q06710 450 aa12.29□□□□□ -0.44
PKP4-205ENST00000426248 A0A087WX48 190 aa12.29□□□□□ -0.44
PKP4-205ENST00000426248 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
PKP4-205ENST00000426248 IGHV3-64A0A075B6Q5 118 aa12.28□□□□□ -0.44
PKP4-205ENST00000426248 LGALS1P09382 135 aaKnown RBP12.28□□□□□ -0.44
PKP4-205ENST00000426248 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
PKP4-205ENST00000426248 ODF3BA8MYP8 253 aa12.28□□□□□ -0.44
PKP4-205ENST00000426248 F8VRH5 84 aa12.28□□□□□ -0.44
PKP4-205ENST00000426248 SPRY2O43597 315 aa12.28□□□□□ -0.44
PKP4-205ENST00000426248 BLCAPP62952 87 aa12.28□□□□□ -0.44
PKP4-205ENST00000426248 UTP20O75691 2785 aaKnown RBP12.28□□□□□ -0.44
PKP4-205ENST00000426248 NDPQ00604 133 aa12.27□□□□□ -0.44
PKP4-205ENST00000426248 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.44
PKP4-205ENST00000426248 CRYBG3Q68DQ2 2970 aa12.27□□□□□ -0.44
PKP4-205ENST00000426248 BRI3O95415 125 aa12.27□□□□□ -0.45
PKP4-205ENST00000426248 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.45
PKP4-205ENST00000426248 PLEKHB2Q96CS7 222 aa12.27□□□□□ -0.45
PKP4-205ENST00000426248 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
PKP4-205ENST00000426248 ZNF493Q6ZR52 646 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 TRBV7-3A0A075B6L6 115 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 IGLV2-11P01706 119 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 TEX49A0A1B0GTD5 131 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 ASIPP42127 132 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 C2orf82Q6UX34 121 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 Q8N8P6 123 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 Q8N9W7 124 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 CFHR4Q92496 578 aa12.26□□□□□ -0.45
PKP4-205ENST00000426248 LY6LH3BQJ8 138 aa12.25□□□□□ -0.45
PKP4-205ENST00000426248 LGALS3P17931 250 aaKnown RBP12.25□□□□□ -0.45
PKP4-205ENST00000426248 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
PKP4-205ENST00000426248 PRO1854Q9UHT4 67 aa12.25□□□□□ -0.45
PKP4-205ENST00000426248 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
PKP4-205ENST00000426248 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
PKP4-205ENST00000426248 AVPP01185 164 aa12.24□□□□□ -0.45
PKP4-205ENST00000426248 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
PKP4-205ENST00000426248 Q8N1Y9 231 aa12.24□□□□□ -0.45
PKP4-205ENST00000426248 IGKV3D-20A0A0C4DH25 116 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 H3BMM0 161 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 PMVKQ15126 192 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 UBE2WQ96B02 151 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 MAST4O15021 2626 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 LOC107984640A0A0U1RRK4 108 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 NDUFA11Q86Y39 141 aa12.23□□□□□ -0.45
PKP4-205ENST00000426248 FAM236AA0A1B0GUQ0 79 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 FAM236BA0A1B0GV22 79 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 ERCC8Q13216 396 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 A0A0U1RRA0 63 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 CRIP2P52943 208 aaPredicted RBP12.22□□□□□ -0.45
PKP4-205ENST00000426248 TEX22C9J3V5 150 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 J3QLI3 93 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 NPBQ8NG41 125 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 HLA-DMBP28068 263 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 SIGLEC15Q6ZMC9 328 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 METTL26Q96S19 204 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
PKP4-205ENST00000426248 LINC01559Q495D7 138 aa12.21□□□□□ -0.45
PKP4-205ENST00000426248 PRR25Q96S07 402 aa12.21□□□□□ -0.45
PKP4-205ENST00000426248 DCHS2Q6V1P9 2916 aa12.21□□□□□ -0.45
PKP4-205ENST00000426248 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
PKP4-205ENST00000426248 NPC2P61916 151 aa12.21□□□□□ -0.45
PKP4-205ENST00000426248 U3KQK5 164 aa12.21□□□□□ -0.45
PKP4-205ENST00000426248 TRAV12-3A0A0B4J271 114 aa12.21□□□□□ -0.46
PKP4-205ENST00000426248 DUX3Q96PT4 197 aa12.21□□□□□ -0.46
PKP4-205ENST00000426248 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
PKP4-205ENST00000426248 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
PKP4-205ENST00000426248 CD7P09564 240 aa12.2□□□□□ -0.46
PKP4-205ENST00000426248 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
PKP4-205ENST00000426248 C5orf47Q569G3 176 aa12.19□□□□□ -0.46
PKP4-205ENST00000426248 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
PKP4-205ENST00000426248 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
PKP4-205ENST00000426248 TMEM126AQ9H061 195 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms