RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FLNAP21333 2647 aaKnown RBP10.14□□□□□ -0.79
USP42-203ENST00000426246 Q8N6K4 173 aa10.14□□□□□ -0.79
USP42-203ENST00000426246 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 IGHV4-59P01825 116 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 HHLA3Q9XRX5 114 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 TRAV2A0A0B4J234 112 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 TRBV7-1A0A0A6YYK4 115 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 NDUFS8O00217 210 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 RAB9AP51151 201 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 INSL3P51460 131 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 CEND1Q8N111 149 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 KIR2DL4Q99706 377 aa10.13□□□□□ -0.79
USP42-203ENST00000426246 IGKV3OR2-268A0A0C4DH90 116 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 EBI3Q14213 229 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
USP42-203ENST00000426246 DPH3P1Q9H4G8 78 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 IGHV1-69P01742 117 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 PIMREGQ9BSJ6 248 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 IGHV7-4-1A0A0J9YVY3 117 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 H7C1H1 209 aa10.12□□□□□ -0.79
USP42-203ENST00000426246 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
USP42-203ENST00000426246 A0A096LNT2 108 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 P0DMU3 169 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 HECTD1Q9ULT8 2610 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 GCN1Q92616 2671 aaKnown RBP10.11□□□□□ -0.79
USP42-203ENST00000426246 HOXA3O43365 443 aaPredicted RBP10.11□□□□□ -0.79
USP42-203ENST00000426246 RASL10AQ92737 203 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
USP42-203ENST00000426246 SPXQ9BT56 116 aa10.11□□□□□ -0.79
USP42-203ENST00000426246 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 KRTAP10-9P60411 292 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 A0A087WX48 190 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 ZNF876PQ49A33 203 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 MUC4Q99102 2169 aa10.1□□□□□ -0.79
USP42-203ENST00000426246 F8VRH5 84 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 AVPP01185 164 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 ZFP2Q6ZN57 461 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 NRACQ8N912 160 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 IGLL5B9A064 214 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 COX6B1P14854 86 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 U3KQK5 164 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 PDZD2O15018 2839 aa10.09□□□□□ -0.79
USP42-203ENST00000426246 ITPR3Q14573 2671 aa10.08□□□□□ -0.8
USP42-203ENST00000426246 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
USP42-203ENST00000426246 ORMDL2Q53FV1 153 aa10.08□□□□□ -0.8
USP42-203ENST00000426246 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
USP42-203ENST00000426246 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
USP42-203ENST00000426246 PROK1P58294 105 aa10.08□□□□□ -0.8
USP42-203ENST00000426246 ZFAND2AQ8N6M9 145 aa10.08□□□□□ -0.8
USP42-203ENST00000426246 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
USP42-203ENST00000426246 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
USP42-203ENST00000426246 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
USP42-203ENST00000426246 MYMXA0A1B0GTQ4 84 aa10.07□□□□□ -0.8
USP42-203ENST00000426246 AZU1P20160 251 aa10.07□□□□□ -0.8
USP42-203ENST00000426246 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
USP42-203ENST00000426246 ID1P41134 155 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 TRBV6-1A0A0K0K1D8 114 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 J3QR89 54 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 PLNP26678 52 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 HERVK_113P61574 105 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 DEFB112Q30KQ8 113 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
USP42-203ENST00000426246 A8MZ25 164 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 ZNF580Q9UK33 172 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 CR1P17927 2039 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 OVOL1O14753 267 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 CIDEAO60543 219 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 PIFOQ8TCI5 191 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 DAND5Q8N907 189 aa10.05□□□□□ -0.8
USP42-203ENST00000426246 DEFB131AP59861 70 aa10.04□□□□□ -0.8
USP42-203ENST00000426246 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
USP42-203ENST00000426246 DGAT2L7PQ6IED9 249 aa10.04□□□□□ -0.8
USP42-203ENST00000426246 C9orf47Q6ZRZ4 202 aa10.04□□□□□ -0.8
USP42-203ENST00000426246 Q8N1Y9 231 aa10.04□□□□□ -0.8
USP42-203ENST00000426246 LGALS1P09382 135 aaKnown RBP10.04□□□□□ -0.8
USP42-203ENST00000426246 DSCR9P59020 149 aa10.04□□□□□ -0.8
USP42-203ENST00000426246 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
USP42-203ENST00000426246 MSMBP08118 114 aa10.03□□□□□ -0.8
USP42-203ENST00000426246 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
USP42-203ENST00000426246 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
USP42-203ENST00000426246 RNASE3P12724 160 aaKnown RBP10.03□□□□□ -0.8
USP42-203ENST00000426246 TMEM238C9JI98 176 aa10.03□□□□□ -0.8
USP42-203ENST00000426246 PLA2G2AP14555 144 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms